| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s35_267V6.1 |
| Family | CE8 |
| Protein Properties | Length: 566 Molecular Weight: 62272.9 Isoelectric Point: 8.8509 |
| Chromosome | Chromosome/Scaffold: 35 Start: 1422598 End: 1425079 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 224 | 527 | 0 |
| VTVAWNGSGDFKTITEAVNKAPTKSETLYVMYIKAGTYNEQVILKTSHFNIMFLGDGATQTIITGRLIVASGVTAYKSATLIVEGQGILAKGIQVCNTAG SKGRQAVAMRVSADQAAFYQCTFDGYPDTLYVHNHRQFYRDCTVLGTIDFIFGNAAAAIQNCRITAKKSTMEGQTNVYTAQGKMDRGSELHIPELHIQCN SFQSCTFDATSELPKSYKTYKTFLGRPWKEYFTTVLLRSKIRAHVDPKGWMPWNASDYRLETSFFAEFESKGPGALPNSGVPWLKQIKTLKEANRYQANK FIQG | |||
| Full Sequence |
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| Protein Sequence Length: 566 Download |
| MKTVVKGPMS GELCTGVVRC LRHRRRKLPR IAACAATQHP DSCSDTLKNS THSDAKIYTS 60 TTVAAASSGI EETRLSVKNS ETPENAPAVE VCEDTLNSAL AVLEAVLEEL KTVDAASFDE 120 IKTRVTAAME FHTTCMDALE EVGGPISTSV QLSTERAKQL FSVALSFVNA YASFGNDFLA 180 WAKSSGLDLT QFNLHRRRLF PLTALHGPTA PPAPNQACKR HYKVTVAWNG SGDFKTITEA 240 VNKAPTKSET LYVMYIKAGT YNEQVILKTS HFNIMFLGDG ATQTIITGRL IVASGVTAYK 300 SATLIVEGQG ILAKGIQVCN TAGSKGRQAV AMRVSADQAA FYQCTFDGYP DTLYVHNHRQ 360 FYRDCTVLGT IDFIFGNAAA AIQNCRITAK KSTMEGQTNV YTAQGKMDRG SELHIPELHI 420 QCNSFQSCTF DATSELPKSY KTYKTFLGRP WKEYFTTVLL RSKIRAHVDP KGWMPWNASD 480 YRLETSFFAE FESKGPGALP NSGVPWLKQI KTLKEANRYQ ANKFIQGHTW VPLTKFPYPS 540 APLKYTSDFK PLSLIPFSSD RSPDE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 9.0e-99 | 224 | 538 | 317 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 3.0e-100 | 34 | 537 | 538 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 3.0e-104 | 32 | 540 | 531 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 1.0e-113 | 32 | 540 | 548 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 2.0e-130 | 224 | 527 | 306 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001758305.1 | 0 | 34 | 537 | 2 | 493 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001759030.1 | 0 | 224 | 565 | 1 | 342 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001767596.1 | 0 | 32 | 541 | 18 | 531 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001767671.1 | 0 | 222 | 541 | 17 | 330 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001783825.1 | 0 | 90 | 543 | 23 | 465 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 223 | 538 | 8 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 226 | 538 | 7 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 3e-16 | 234 | 498 | 18 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 3e-16 | 234 | 498 | 18 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 3e-16 | 234 | 498 | 18 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FC368629 | 277 | 250 | 524 | 0 |
| DT759654 | 287 | 220 | 506 | 0 |
| JG606995 | 309 | 232 | 538 | 0 |
| HO852920 | 435 | 119 | 538 | 0 |
| DT762011 | 272 | 220 | 491 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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