| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra003364 |
| Family | GT48 |
| Protein Properties | Length: 2263 Molecular Weight: 261259 Isoelectric Point: 9.0597 |
| Chromosome | Chromosome/Scaffold: 07 Start: 12836055 End: 12849777 |
| Description | glucan synthase-like 11 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT48 | 1381 | 2114 | 0 |
| VPQNLEARRRITFFANSLFMNMPNAPRIRDMLSFSVLTPYYKEDVLYSEEELNKENEDGISILFYLQKIYPDEWTNFLDRLNDPKLLEKDKSEFLREWVS YRGQTLARTVRGMMYYRQALELQCYQEVAGENAKFSVHQAMASNDEHQKAFLERAKALADLKFTYVVSCQVYGNQKKSGDIHNRSCYTNILQLMLKYPSL RVAYVDEREETADAKSPKVFYSVLLKGGAKFDEEIYRIKLPGPPAEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYFEEAFKLRNVLEEFKKERVGRRK PTILGLREHIFTGSVSSLAWFMSNQESSFVTIGQRILANPLRVRFHYGHPDIFDRIFHITRGGVSKASKVINLSEDIFGGFNSTLRGGYVTHHEYIQVGK GRDVGLNPISIFEAKVANGNGEQTLSRDVYRLGHRFDFYRMLSFYFTTIGFYFSSMLTVITVYAFLYGRMYMVMSGAEKEILRLATPNQLAALEQALATQ SIFQLGFLMVLPMVMEIGLEEGFRSAIVDFFIMQLQLASVFFTFQLGTKSHYYGRTILHGGSKYRPTGRGFVVFHAKFAENYRLYSRSHFVKGLELLLLL IVYQVYGHSYRSSNLYLYITVSMWFMVGSWLFAPFIFNPSGFEWQKTVDDWTDWKRWLDDRGGIGIPVDKSWESWWSVEQEYLKHTNIRGRILEITLALR FFIYQYGIVYQLNISQNSKSFLVYGLSWVVLLTS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 2263 Download |
| MTITRTLFES KTDKCYAPSF VAVNLCLALI DGALAFIAFL QLSRFHRRDK RVGWTRQKVL 60 HLMIGSSNTA FPKILFLATF LLLLSFWVDV CHQGNGEEED DDDEENSVQQ VLLEKAKSKP 120 GSSSASDRRK CCSFHGIHVG TRQKFVVAAV VLVFILMISF AILIWIASGD NSADPSLLAE 180 VYVDIFASTL LITGGGLCFY GMRLFFNLRK VRSEQVSSEM RKVSGLAGVS VVCFTVSSLI 240 ALLTHIPLFY HWNPNKLHGI NALVLLIIYY FIGSTLPLAF VLWVLRELPP QNMVSRQEEQ 300 TRITYVNYDA VPRQPPQQWT STTVSKNQVS EFELFGEEGV TDCSYSRLAM EASSSGTAEL 360 PRSLSRRAAP SRATTMMIDR PNEDASAMDS ELVPSSLASI APILRVANEI EKDNPRVAYL 420 CRFHAFEKAH RMDDTSSGRG VRQFKTYLLH RLEKEEEETK PQLAKSDPRE IQAYYQNFYE 480 KYIKEGETSR KPEEMARLYQ IASVLYDVLK TVVPSPKVDY ETRRYAEEVE RKRDRYEHYN 540 ILPLNAVGTK PAIVELPEVK AAFSAVRNVR NLPKRRVHMP SNAPDEMRKA RSRRFNDILE 600 WLASEFGFQR GSVANQREHI ILLLANADIR NRTDEEYDGL KSSTVTELMD KTFKNYYSWC 660 KYLHREPNLK FPPDCDVQQL QLIYISLYLL IWGEASNVRF MPECICYIFH HMANDVYGIL 720 FSNVKAVSGE AYETGEIIDE ETFLRNVITP IYQVIRNEAR RNKGGTASHS QWRNYDDLNE 780 YFWSRKCFKI GWPLDPNADF FQNSDESTPQ NERLNQVTYG KRKPKTNFVE VRTFWNLFRD 840 FDRMWIFFVM AFQAMVIVGW NGSGSLGEIF DKDIFKKVLT VFITSAYLTL LQTALDIILT 900 FNAWKNFKLS QILRYLLKLA VAAMWAVLLP IAYAKSVQRP SGVVKFFSTW TGDWKDKSFY 960 NYAVSFYVLP NILAAFLFLV PPFRRVMECS DMRPKLYVGR GMHEDMLSLF KYTSFWIMLL 1020 ISKLSFNYYV EILPLIKPTK MIMNLHIRNY QWHEFFPYAN NNVGVVIAVW APIVLVYLMD 1080 AQIWYAIFST LFGGIHGAFS HLGEIRTLGM LRSRFESIPI AFSRTLMPTE NANRKHADDF 1140 GDQKKITNFS QVWNEFIISM RREDKISDRD RDLLLVPSSS GDVSVIQWPP FLLASKIPIA 1200 VKMAKDFKGK EDAELFRKVT SDSYMHYAVT ESYETLKKII SALLEDEADR RVMNQVFSEV 1260 DMSIQKQRFI YDFRMSGLTL LSDKLEKFLR ILLSDYEDEG TYKSQLINVF QDVIEIITQD 1320 LLVNGHEIVE RARIHSPDVK NEKKEQRFEK INIHLIQDKR WRDKVVRLHL LLSVKESAIN 1380 VPQNLEARRR ITFFANSLFM NMPNAPRIRD MLSFSVLTPY YKEDVLYSEE ELNKENEDGI 1440 SILFYLQKIY PDEWTNFLDR LNDPKLLEKD KSEFLREWVS YRGQTLARTV RGMMYYRQAL 1500 ELQCYQEVAG ENAKFSVHQA MASNDEHQKA FLERAKALAD LKFTYVVSCQ VYGNQKKSGD 1560 IHNRSCYTNI LQLMLKYPSL RVAYVDEREE TADAKSPKVF YSVLLKGGAK FDEEIYRIKL 1620 PGPPAEIGEG KPENQNHAII FTRGEALQTI DMNQDNYFEE AFKLRNVLEE FKKERVGRRK 1680 PTILGLREHI FTGSVSSLAW FMSNQESSFV TIGQRILANP LRVRFHYGHP DIFDRIFHIT 1740 RGGVSKASKV INLSEDIFGG FNSTLRGGYV THHEYIQVGK GRDVGLNPIS IFEAKVANGN 1800 GEQTLSRDVY RLGHRFDFYR MLSFYFTTIG FYFSSMLTVI TVYAFLYGRM YMVMSGAEKE 1860 ILRLATPNQL AALEQALATQ SIFQLGFLMV LPMVMEIGLE EGFRSAIVDF FIMQLQLASV 1920 FFTFQLGTKS HYYGRTILHG GSKYRPTGRG FVVFHAKFAE NYRLYSRSHF VKGLELLLLL 1980 IVYQVYGHSY RSSNLYLYIT VSMWFMVGSW LFAPFIFNPS GFEWQKTVDD WTDWKRWLDD 2040 RGGIGIPVDK SWESWWSVEQ EYLKHTNIRG RILEITLALR FFIYQYGIVY QLNISQNSKS 2100 FLVYGLSWVV LLTSLLVLKM VSMGRRKFGT DFQLMFRILK ALLFLGFLSV MTVLFVVCEL 2160 TLTDLSASIL AFLPTGWAIL LIGQVLRSPI KALGIWDSVK ELGRAYEKIM GLVIFAPIAV 2220 LSWFPIVSEF QARLLFNQAF SRGLQISMIL AGRKDKAASS YK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06454 | DUF1084 | 0.003 | 27 | 63 | 37 | + Protein of unknown function (DUF1084). This family consists of several hypothetical plant specific proteins of unknown function. | ||
| pfam06454 | DUF1084 | 8.0e-8 | 162 | 291 | 134 | + Protein of unknown function (DUF1084). This family consists of several hypothetical plant specific proteins of unknown function. | ||
| pfam04652 | DUF605 | 3.0e-8 | 398 | 511 | 124 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 1.0e-50 | 692 | 795 | 105 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1381 | 2099 | 802 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF24822.1 | 0 | 362 | 2262 | 22 | 1930 | AC007592_15 F12K11.17 [Arabidopsis thaliana] |
| RefSeq | NP_172136.1 | 0 | 362 | 2262 | 22 | 1933 | ATGSL07 (glucan synthase-like 7); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_191469.2 | 0 | 350 | 2262 | 1 | 1934 | ATGSL11 (glucan synthase-like 11); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Swiss-Prot | Q9LYS6 | 0 | 350 | 2262 | 1 | 1921 | CALS6_ARATH RecName: Full=Putative callose synthase 6; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 11 |
| RefSeq | XP_002307554.1 | 0 | 352 | 2257 | 2 | 1930 | predicted protein [Populus trichocarpa] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
