Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si016068m |
Family | GT48 |
Protein Properties | Length: 1955 Molecular Weight: 224986 Isoelectric Point: 9.5643 |
Chromosome | Chromosome/Scaffold: 1 Start: 42017703 End: 42033495 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1063 | 1810 | 0 |
VPTNLDARRRISFFANSLFMSMPRAPKVRQMLPFSVLTPYYKEDVLFSSHALEEPNEDGVSILFYLQKIYPDEWNNFLQRVDCKNEEELRETEQSEEELR LWASYRGQTLTRTVRGMMYYRQALVLQAFLDMARDEDLMEGFRAADLLSDESQLLTQCKAIADMKFTYVVSCQQYGIQKRSGDPRAQDILRLMTTYPSLR VAYIDEVEEPSKDRNKKIEKVYYSALVKAAVTKPDDPGQKLDQDIYRIKLPGNAMLGEGKPENQNHAIIFTRGEGLQTIDMNQEHYMEETLKMRNLLQEF LKKHDGVRYPSILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVT HHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTLSRDVYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGLDEALATGKRFIHNE PLQVALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVLMQLQLASVFFTFSLGTKTHYYGTTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFV KGIELMILLIVYEIFGQSYRGAIAYIFITISMWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEKEQEPLRLSGKRGI ILEIVLALRFFIYQYGLVYHLNITTHTKSVLVYCLSWVVIFVILLVMK |
Full Sequence |
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Protein Sequence Length: 1955 Download |
MASSSGGRRM APGGDSSSAS PASAGAGAGP RRILRTQTAG NLGESIFDSE VVPSSLVEIA 60 PILRVANEVE ASNPRVAYLC RFYAFEKAHR LDPTSSGRGV RQFKTALLQR LERENDPTLK 120 GRVKQSDARE MQSFYQHYYK KYIQALQNAA DKADRAQLTK AYQTAAVLFE VLKAVNVSQK 180 IEVDQSILET HNQVEEKKKL YLPYNILPLD PDSANQAIMR YPEIQAAFHA LRNTRGLPWP 240 KEHEKKPDAD LLGWLQAMFG FQKDNVSNQR EHLILLLANV HIRQIPKPDQ QPKLDDRALD 300 TVMKKLFKNY KKWCKYLGRK SSLWLPTIQQ EVQQRKLLYM GLYLLIWGEA ANLRFMPECL 360 CYIYHHMAFE LYGMLAGNVS PTTGENVKPA YGGEEEAFLK KVVTPIYKVI EKEAERSKIV 420 KSKHSHWRNY DDLNEYFWSR DCFRLGWPMR ADADFFKTPN DDRRHPVNGE DRPVANGNWM 480 GKVNFVEVRS FWHIFRSFDR MWSFLILSLQ AMIIIAWNGG TPSDIFDRGV FKQVLSIFIT 540 AAILKLGQAI LDIILSWKAR KNMSLVVKLR YILKLLSAAA WVVILPVTYA YTWQNPTGLA 600 RTIKSWLGDG QNQPSLYILA VVVYLAPNIL SAVLFLFPVI RRALERSNLK VVTFMMWWSQ 660 PRLFVGRGMH EGAFSLFKYT MFWVLLLATK LVVSFYVEIK PLVQPTQDIM KEPIRTFKWH 720 EFFPHANNNI GVVIALWAPI ILVYFMDTQI WYAIFSTIVG GIYGACRRLG EIRTLGMLRS 780 RFESLPKAFN QCLIPSDTSK RRGFRAAFSS KPSKTPEGTK EEEKIAARFA QIWNLIITSF 840 REEDLINNRE KDLLLVPYCK DRDMDIIQWP PFLLASKIPI ALDMAADSGG KDRDLKKRMK 900 SDPYFTYAIK ECYASFKNII YALVIGPRER DVIQKIFDVV DEHIAGDTLI TELNMSNLPT 960 LSKKFIELLD LLNNIEDQGQ VIILFQDMLE VVTRDIMDEQ LSGLLESIHG GNNRRYEGIT 1020 PLDQQVQLFT KAIDFPVKET QAWTEKIKRL HLLLTVKESA MDVPTNLDAR RRISFFANSL 1080 FMSMPRAPKV RQMLPFSVLT PYYKEDVLFS SHALEEPNED GVSILFYLQK IYPDEWNNFL 1140 QRVDCKNEEE LRETEQSEEE LRLWASYRGQ TLTRTVRGMM YYRQALVLQA FLDMARDEDL 1200 MEGFRAADLL SDESQLLTQC KAIADMKFTY VVSCQQYGIQ KRSGDPRAQD ILRLMTTYPS 1260 LRVAYIDEVE EPSKDRNKKI EKVYYSALVK AAVTKPDDPG QKLDQDIYRI KLPGNAMLGE 1320 GKPENQNHAI IFTRGEGLQT IDMNQEHYME ETLKMRNLLQ EFLKKHDGVR YPSILGVREH 1380 IFTGSVSSLA WFMSNQETSF VTIGQRVLAN PLRVRFHYGH PDIFDRLFHL TRGGVSKASK 1440 IINLSEDIFA GFNSTLREGN VTHHEYMQVG KGRDVGLNQI SLFEAKIANG NGEQTLSRDV 1500 YRLGHRFDFF RMLSCYYTTI GFYFSTMITV WTVYVFLYGR LYLVLSGLDE ALATGKRFIH 1560 NEPLQVALAS QSFVQLGFLM ALPMMMEIGL ERGFRTALSD FVLMQLQLAS VFFTFSLGTK 1620 THYYGTTLLH GGAEYRATGR GFVVFHAKFA ENYRLYSRSH FVKGIELMIL LIVYEIFGQS 1680 YRGAIAYIFI TISMWFMVVT WLFAPFLFNP SGFEWQKIVD DWTDWNKWIS NRGGIGVPPE 1740 KSWESWWEKE QEPLRLSGKR GIILEIVLAL RFFIYQYGLV YHLNITTHTK SVLVYCLSWV 1800 VIFVILLVMK TVSVGRRRFS AEFQLVFRLI KGLIFITFIS IIIILIAIPH MTVQDMFVCI 1860 LAFMPTGWGL LLIARAIKPA ITKFQLWGSI KALARGYEII MGLLLFTPIA FLAWFPFVSE 1920 FQTRMLFNQA FSRGLQISRI LGGHKKDRAT RNKE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 5.0e-11 | 59 | 173 | 120 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 7.0e-57 | 334 | 450 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1063 | 1806 | 818 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD23015.1 | 0 | 31 | 1954 | 35 | 1969 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
DDBJ | BAD62105.1 | 0 | 31 | 1954 | 28 | 1959 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
GenBank | EEE58116.1 | 0 | 31 | 1954 | 35 | 1918 | hypothetical protein OsJ_09005 [Oryza sativa Japonica Group] |
RefSeq | XP_002439067.1 | 0 | 31 | 1954 | 30 | 1965 | hypothetical protein SORBIDRAFT_10g030970 [Sorghum bicolor] |
RefSeq | XP_002453103.1 | 0 | 8 | 1954 | 11 | 1942 | hypothetical protein SORBIDRAFT_04g038510 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2lxm_A | 0.002 | 63 | 172 | 21 | 128 | B Chain B, Lip5-chmp5 |
PDB | 2lxl_A | 0.003 | 63 | 172 | 21 | 128 | A Chain A, Lip5(mit)2 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |