Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10042478 |
Family | GT48 |
Protein Properties | Length: 1946 Molecular Weight: 223853 Isoelectric Point: 8.5274 |
Chromosome | Chromosome/Scaffold: 123 Start: 2319878 End: 2333159 |
Description | glucan synthase-like 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1076 | 1804 | 0 |
IPANLEAKRRISFFATSLFTDMPVAPKVRNMLSFSVLTPHFMEDVTYSRKDLRSSKKEEVSILFYMQKIYPDEWENFLERMGWENSDASNEENINELRNW ASFRGQTLSRTVRGMMYYREALRVQAFLEMAEDEDILEGYDAAERNNRTLSAQLDALADMKFSYVLSFQKFGSLKSIGDPRALDVLDLMTRYPSFRVAYV EEKEEIVSGKHPKVYSSVLVKAVNGLDQEIYRIKLPGEPNIGEGKPENQNHAIIFTRGEALQTIDMNQDNYFEEAFKMRNLLQEFLQRQGRRPPTILGLR EHIFTGSVSSLAWFMSYQETSFVTIGQRLLSNPLRVRFHYGHPDVFDRVFHITRGGISKASKTINLSEDVFAGFNSTLRRGCITYNEYLQVGKGRDVGLN QISKFEAKVANGNSEQTICRDIYRLARGFDFFRMLSCYFTTIGFLFSNMISVIGVYVFLYVQLYLVLSGLQKSLLFEARMHDIQSLETALASQSFIQLGL LTGLPMVMEIGLEKGFLTALKDFVLMQLQLAAVFFTFSLGTKIHYYGRTILYGGAMYRPTGRKVVVFHASFTENFRLYARSHFVKGFELVILLIVYDLFR RSYQSSMAYVMITYSIWFMSITWLFAPFLFNPSGFTWEKIVDDWKDWNKWIRQQGGIGIQQDKSWQSWWNDEQTHLRQAGVGARLGEIILSIRFFMYQYG LVYHLDISQHSRNFLVYVLSWVVIVAIFL |
Full Sequence |
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Protein Sequence Length: 1946 Download |
MSEIVVADPI IDPGASSSSY VRRKGGETAA SSYEVTRSLT YGDAGASTSG QGSNGPEPFD 60 SERLPPTLTR EIQRFLRVAN LIETEEPRIA YLCRFHAFEI AHNMDHNSTG RGVRQFKTSL 120 LQRLEQDEET TLRRRKEKSD IRELRRVYHA YKDYILKSGA GFDLDDRHRE KLINASRIAS 180 VLFEVLKTVT NAAGTKALAE REGISSKSEF YVPYNILPLD HGGIQQAIMQ FPEIKAAVMA 240 IRNTRGLPPP EDFHRRGAFL DLFEFLQCCF GFQEGNVANQ REHLILLLAN TYIRLCYKQA 300 SNSKLVDGAV DELMKKFFKN YANWCKFLGR KNNIRLPYVK QEAQQYKILY IGLYLLIWGE 360 AANLRLMPEC LCYIFHQMAN ELHDILTSAV SLETGEKMKP AYGGDFESFL NHVVTPIYMV 420 ISKEAEQGRG TADHSTWRNY DDLNEFFWSP DCFQLGWPMR TDHDFFFSPS AKKKEVKGAA 480 KKKKKKREVE VDEELRGQEE NEAGATTEKQ EPKWLGKTNF VEVRSFWQIF RSFDRMWTFF 540 ILSLQAMIVM ACHDLENPLE ILDAEVFEDI LSIFITSAIL RFAQAILEIA FTWKARHTMD 600 ILEKRKQALK LAFGVIWTIV LPVLYAKSRS NYTCYSKRHG SWSGQFCISP YMVAVAIYMT 660 TNAVEMVLFF VPAVRKFIEI SNCQIFRTFS WWTQPRLYVG RGMQETQVKP LIEPTRLILK 720 IGVQKYDWHE LFPKVKSNAG AIVAIWAPII VVYFMDTQIW YSVFCAIFGG VYGILHHLGE 780 IRTLGMLRSR FHTLPYAFYV SLIPPSAKSD QKARGFFYKR SHNGFESGTS GVAKFALVWN 840 QIINAFRQED LISNRELDLM SIPMSSELLS GMIRWPIFLL TNKLSTALSI AQEFQGKDES 900 LFRKIKKDKY MYCAVKECYE SLKYVLEILI VGEQEKRVVL SILNEVEDSI ARSSFLKDFK 960 ISELPALRAK CVDLLELLVE GDEINHANVV QVLQDMFELV TNDMMTTSSR IWELLSYSPK 1020 LEEDTPYFSV KIEPQLFDSA AGKDAIHFPF PDSGPLKEQI KRFLHLLTVG DKAMDIPANL 1080 EAKRRISFFA TSLFTDMPVA PKVRNMLSFS VLTPHFMEDV TYSRKDLRSS KKEEVSILFY 1140 MQKIYPDEWE NFLERMGWEN SDASNEENIN ELRNWASFRG QTLSRTVRGM MYYREALRVQ 1200 AFLEMAEDED ILEGYDAAER NNRTLSAQLD ALADMKFSYV LSFQKFGSLK SIGDPRALDV 1260 LDLMTRYPSF RVAYVEEKEE IVSGKHPKVY SSVLVKAVNG LDQEIYRIKL PGEPNIGEGK 1320 PENQNHAIIF TRGEALQTID MNQDNYFEEA FKMRNLLQEF LQRQGRRPPT ILGLREHIFT 1380 GSVSSLAWFM SYQETSFVTI GQRLLSNPLR VRFHYGHPDV FDRVFHITRG GISKASKTIN 1440 LSEDVFAGFN STLRRGCITY NEYLQVGKGR DVGLNQISKF EAKVANGNSE QTICRDIYRL 1500 ARGFDFFRML SCYFTTIGFL FSNMISVIGV YVFLYVQLYL VLSGLQKSLL FEARMHDIQS 1560 LETALASQSF IQLGLLTGLP MVMEIGLEKG FLTALKDFVL MQLQLAAVFF TFSLGTKIHY 1620 YGRTILYGGA MYRPTGRKVV VFHASFTENF RLYARSHFVK GFELVILLIV YDLFRRSYQS 1680 SMAYVMITYS IWFMSITWLF APFLFNPSGF TWEKIVDDWK DWNKWIRQQG GIGIQQDKSW 1740 QSWWNDEQTH LRQAGVGARL GEIILSIRFF MYQYGLVYHL DISQHSRNFL VYVLSWVVIV 1800 AIFLLVKAVD MGRQLFSAKY HLGFRLFKAF LFIAVVTIIV TLSLACQLSL RDLIVCCLAF 1860 LPTGWGLLLI AQAVRPKIEE TVIWDFTEVL GKAYDYGMGV ILLAPIAVLA WLPIISAFQT 1920 RFLFNEAFNR HLQIQPILAG KKKQR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 3.0e-5 | 72 | 127 | 56 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 2.0e-45 | 358 | 460 | 105 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1076 | 1823 | 839 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB02389.1 | 0 | 3 | 1945 | 4 | 1972 | glucan synthase-like protein [Arabidopsis thaliana] |
RefSeq | NP_188075.1 | 0 | 3 | 1945 | 4 | 1973 | ATGSL04 (glucan synthase-like 4); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Swiss-Prot | Q9LUD7 | 0 | 3 | 1945 | 4 | 1976 | CALS8_ARATH RecName: Full=Putative callose synthase 8; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 4 |
RefSeq | XP_002267956.1 | 0 | 56 | 1944 | 31 | 1925 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317363.1 | 0 | 1 | 1945 | 1 | 1961 | predicted protein [Populus trichocarpa] |