| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10039199 |
| Family | GT48 |
| Protein Properties | Length: 1979 Molecular Weight: 228365 Isoelectric Point: 9.3474 |
| Chromosome | Chromosome/Scaffold: 34 Start: 2058302 End: 2070718 |
| Description | glucan synthase-like 12 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT48 | 1076 | 1833 | 0 |
| VPSNLEARRRISFFSNSLFMDMPTAPKVRNMLSFSVLTPYYTEEVLFSLRELEVPNEDGVSILFYLQKIYPDEWNNFLERVNCTGEEELKGIDDLEEELR LWASYRGQTLTRTVRGMMYYRKALELQAFLDMARDEDLMEGYKAIELNTELHLRGERSLLAQCQAIADMKFTYVVSCQQYGIHKRSADPRAQDTLRLMTA YPSLRVAYIDEVEEPNKDKSKKVNQKVYYSVLVKAASPKAIDSSEPVQHLDEVIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEAL KMRNLLQEFLKKHDGVRYPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFN STLREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTVGFYFSTLITVLIVYVFLYGRLYLVLSGLEEGLK NQRAIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERGFRTALSEFVLMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRPTGRGFVVFHAKFADNY RLYSRSHFVKGIEMIILLVVYEIFGQTYRSAVAYVLITISMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEEEQEH LHHSGKRGIVAEILLSLRFFIYQYGLVYHLSITKKAKTKSFLVYGISWLVIFLVLFVM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1979 Download |
| MASSSRMGSD QATPPQPQQR RIMRTQTAGN LGESIFDSEV VPSSLVEIAP ILRVANEVES 60 SNPRVAYLCR FYAFEKAHRL DPTSSGRGVR QFKTALLQRL ERENDPTLKG RVKKSDAREM 120 QSFYQHYYKK YIQALQNAAD KADRAQLTKA YQTANVLFEV LKAVNMTQSI EVDREILEAQ 180 DKVAEKTQLY VAYNILPLDP DSANQAIMRY PEIQAAVVAL RNTRGLPWPK DHKKKDEDIL 240 DWLQAMFGFQ KGNVANQREH LILLLANVHI RQFPKMDQQP KLDDRALTDV MKKLFKNYKK 300 WCKYLDRKSS LWMPTIQQEV QQRKLLYMGL YLLIWGEAAN LRFMPECLCY IYHHMAFELY 360 GMLAGNVSPM TGENVKPAYG GEEEAFLTKV VTPIYNVIAK EAERSRKGKS KHSQWRNYDD 420 LNEYFWSVDC FRLGWPMRAD ADFFSLPAEQ RHFEKDGDNN KPAYKDRWVG KVNFVEIRTF 480 WHIFRSFDRM WSFFILCLQA MIIIAWNDSA GRPIFTGDVV KKVLSVFITA AILKLGQVEM 540 YSEGHVEAVT NAALLIDSAV LDVILSWKAR QIMSFHVKLR YILKVVSAAA WVVVLPVTYA 600 YTWENPPGFA RTIKSWFGNS NSSPTLFILA VVIYLSPNML SAVLFLFPFV RRFLEQSHYR 660 IVMLMMWWSQ PPLYVARGMH ESTLALFNYT VFWVLLIITK LAFSYFIEIR PLVGPTKAIM 720 SVHISTFQWH EFFPQARNNI GVVIALWAPI ILVYFMDAQI WYAIFSTIFG GIYGAFRRLG 780 EIRTLGMLRS RFQSLPGAFN ARLMPEERSE PKKKGLRATL SRNFATIPSN KEKEAARFAQ 840 LWNKIITSFR EEDLISNREM DLLLVPYWAD RDLDLIQWPP FLLASMIPIA LDMAKDSNGK 900 DKELKKRIEA ESYMSCAVRE CYASFRNIIK FLVQGDREKE VIEYIFEEVD KHIEAGDLIS 960 EYKMSALPNL YEHFVKLIKY LLVNKPEDRD QVVILFQDML EVVTRDIMME DHISSLVDSI 1020 HGGPGHEGMV PLEQQYQLFA SSGAIKFPIQ PVTEAWKEKI KRLDLLLTTK ESAMDVPSNL 1080 EARRRISFFS NSLFMDMPTA PKVRNMLSFS VLTPYYTEEV LFSLRELEVP NEDGVSILFY 1140 LQKIYPDEWN NFLERVNCTG EEELKGIDDL EEELRLWASY RGQTLTRTVR GMMYYRKALE 1200 LQAFLDMARD EDLMEGYKAI ELNTELHLRG ERSLLAQCQA IADMKFTYVV SCQQYGIHKR 1260 SADPRAQDTL RLMTAYPSLR VAYIDEVEEP NKDKSKKVNQ KVYYSVLVKA ASPKAIDSSE 1320 PVQHLDEVIY RIKLPGPAIL GEGKPENQNH AIIFTRGEGL QTIDMNQDNY MEEALKMRNL 1380 LQEFLKKHDG VRYPTILGLR EHIFTGSVSS LAWFMSNQET SFVTIGQRLL ANPLKVRFHY 1440 GHPDVFDRLF HLTRGGVSKA SKVINLSEDI FAGFNSTLRE GNVTHHEYIQ VGKGRDVGLN 1500 QISMFEAKIA NGNGEQTLSR DIYRLGHRFD FFRMLSCYFT TVGFYFSTLI TVLIVYVFLY 1560 GRLYLVLSGL EEGLKNQRAI RDNKPLQVAL ASQSFVQIGF LMALPMLMEI GLERGFRTAL 1620 SEFVLMQLQL APVFFTFSLG TKTHYYGRTL LHGGAKYRPT GRGFVVFHAK FADNYRLYSR 1680 SHFVKGIEMI ILLVVYEIFG QTYRSAVAYV LITISMWFMV GTWLFAPFLF NPSGFEWQKI 1740 VDDWTDWNKW ISNRGGIGVP PEKSWESWWE EEQEHLHHSG KRGIVAEILL SLRFFIYQYG 1800 LVYHLSITKK AKTKSFLVYG ISWLVIFLVL FVMKTVSVGR RKFSANFQLV FRLIKGLIFI 1860 TFISILVVLI ALPHMTIQDI IVCILAFMPT GWGMLLIAQA CKPVVHRAGF WGSVRTLARG 1920 YEILMGLLLF TPVAFLAWFP FVSEFQTRML FNQAFSRGLQ ISRILGGQRK DRSSRNKE* 1980 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04652 | DUF605 | 3.0e-10 | 48 | 162 | 120 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 5.0e-59 | 322 | 438 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1076 | 1832 | 838 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16456.1 | 0 | 4 | 1978 | 2 | 1948 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283298.1 | 0 | 4 | 1978 | 2 | 1947 | PREDICTED: similar to Callose synthase 3 [Vitis vinifera] |
| RefSeq | XP_002299147.1 | 0 | 7 | 1978 | 1 | 1940 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304888.1 | 0 | 7 | 1978 | 1 | 1961 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528124.1 | 0 | 1 | 1978 | 1 | 1955 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lxm_A | 0.003 | 52 | 161 | 21 | 128 | B Chain B, Lip5-chmp5 |
| PDB | 2lxl_A | 0.004 | 52 | 161 | 21 | 128 | A Chain A, Lip5(mit)2 |
