| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00057448m |
| Family | GT48 |
| Protein Properties | Length: 1710 Molecular Weight: 198517 Isoelectric Point: 9.7566 |
| Chromosome | Chromosome/Scaffold: 028603 Start: 35 End: 6781 |
| Description | glucan synthase-like 5 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 798 | 1567 | 0 |
| VPKNLEARRRIAFFSNSLFMNIPRATQVEKMMAFSVLTPYYNEEVLYSKDQLYKENEDGISILYYLQKIYPDEWEYFLERMKREGMSDIKELYIEKERLR DLRHWVSYRGQTLTRTVRGMMYYYEALKMLTFLDSASEHDLKTGSRELATMGSSRIGSSRHDGVVGGPGYHSRASSSRALSRASSSVSSLFKGSEYGTVL MKYTYVVACQIYGQQKSKNDPCAFEILELMKKYEALRVAYVDERQNNGGETEYFSVLVKYDQQLQREVEIYRVKLPGELKLGEGKPENQNHALIFTRGDA VQTIDMNQDNYFEEALKMRNLLEEFNRHYGIRKPKILGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLADPLKVRMHYGHPDVFDRLWFLGRGGISKA SKVINISEDIFAGFNCTLRGGNVTHHEYIQVGKGRDVGLNQVSLFEAKVASGNGEQTLSRDVYRLGHRLDFFRMLSFFYTTVGFYFNTMMVVLTVYAFVW GRFYLALSGLEDYISKNTSSTSNAALGAVLNQQFIIQLGLFTALPMIIENSLEHGFLTAVWDFMKMQLQFASVFYTFSMGTKTHYYGRTILHGGAKYRAT GRGFVVEHKKFAENYRLYARSHFVKAIELGVILTLYASYGSASGNTLVYILLTLSSWFLVSSWILAPFIFNPSGLDWLKNFNDFEDFLNWIWFRGGISVK IDQSWEKWWEDETDHLRMTGLWGSILEIILDLRFFFFQYAIVYRLHIAGQSRSILVYLLSWACILLAFVA | |||
| Full Sequence |
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| Protein Sequence Length: 1710 Download |
| MDWLGAFFGF QRDNVRNQRE HLVLLLANAQ MRLSSADFSD TLDPRIAHQI RKKLLRNYTS 60 WCGFLGRRPN VHVPDGDPRV DLLFTGLHLL VWGEASNLRF VPECLCYIYH HMALELHRIL 120 EGYTDVATGR PANPAVHGEN AFLTRVVTPI YNVIRAEVQS SRGGTAPHAA WRNYDDINEY 180 FWRRDVFDRL GWPMEQSRQF FRTPPDRTRV RKTGFVEVRS FWNIYRSFDR LWVMLVLYLQ 240 AAAIVAWEGA TWPWDDLLSS RGSKSKDTQV RVLTIFITWA ALRLLQSLLD IGTQFRRAFR 300 DGRMLAGRMV LKAIAAAAWV LAFSVLYKGI WDQRRSNGQW SSVVNSRIMR FLYAVALFVI 360 PEVLALVLFI VPWVRNALEK TNWKICYALT WWFHSRSFVG RGLREGTIDN VKYSIFWVLL 420 LAVKFAFSYF LQIRPLVKPT KEIYKLSDIQ YTWHEFFGRS NRFAVFVLWL PVVLIYLMDI 480 QIWYAIFSSL TGAFVGLFAH LGEIRDMKQL RLRFQFFASA MSFNIMPEEQ QVNESFLPSR 540 LRNFWQRLQL RYGFSRSFRK IESNQVEARR FALVWNEIIS KFREEDIVSD REVELLELPP 600 ELWNVRVIRW PCFLLCNELS LALGQAKEVK GPDRRLWRKI CKNDYRRCAV IEVYDSAKHL 660 LLEILKEGTE EHGIVTQLFN DFDGSMQMEK FTVEYKKTEL HSVHTRLVAL LSLLLKPTKD 720 VTKIVNALQT LYDVVIRDFQ AEKRSMEQLR NEGLAQSRRT NLLFVDAVVL PGEENTTFYK 780 QVRRMHTILT SRDSMINVPK NLEARRRIAF FSNSLFMNIP RATQVEKMMA FSVLTPYYNE 840 EVLYSKDQLY KENEDGISIL YYLQKIYPDE WEYFLERMKR EGMSDIKELY IEKERLRDLR 900 HWVSYRGQTL TRTVRGMMYY YEALKMLTFL DSASEHDLKT GSRELATMGS SRIGSSRHDG 960 VVGGPGYHSR ASSSRALSRA SSSVSSLFKG SEYGTVLMKY TYVVACQIYG QQKSKNDPCA 1020 FEILELMKKY EALRVAYVDE RQNNGGETEY FSVLVKYDQQ LQREVEIYRV KLPGELKLGE 1080 GKPENQNHAL IFTRGDAVQT IDMNQDNYFE EALKMRNLLE EFNRHYGIRK PKILGVREHV 1140 FTGSVSSLAW FMSAQETSFV TLGQRVLADP LKVRMHYGHP DVFDRLWFLG RGGISKASKV 1200 INISEDIFAG FNCTLRGGNV THHEYIQVGK GRDVGLNQVS LFEAKVASGN GEQTLSRDVY 1260 RLGHRLDFFR MLSFFYTTVG FYFNTMMVVL TVYAFVWGRF YLALSGLEDY ISKNTSSTSN 1320 AALGAVLNQQ FIIQLGLFTA LPMIIENSLE HGFLTAVWDF MKMQLQFASV FYTFSMGTKT 1380 HYYGRTILHG GAKYRATGRG FVVEHKKFAE NYRLYARSHF VKAIELGVIL TLYASYGSAS 1440 GNTLVYILLT LSSWFLVSSW ILAPFIFNPS GLDWLKNFND FEDFLNWIWF RGGISVKIDQ 1500 SWEKWWEDET DHLRMTGLWG SILEIILDLR FFFFQYAIVY RLHIAGQSRS ILVYLLSWAC 1560 ILLAFVALVT VAYFRDRYSA KKHIRYRLVQ AIIVGGTVAA IVVLLEFTKF QFLDTFTSLL 1620 AFLPTGWGII SIALVFKPYL RKSEMVWKTV VTVARLYDIL FGVIVMAPVA LLSWLPGLQE 1680 MQTRILFNEA FSRGLHISQI ITGKKAHGF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam14288 | FKS1_dom1 | 3.0e-52 | 82 | 194 | 113 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 798 | 1585 | 852 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB84371.1 | 0 | 1 | 1708 | 73 | 1768 | 1,3-beta-glucan synthase component-like [Oryza sativa Japonica Group] |
| GenBank | EEC71251.1 | 0 | 1 | 1516 | 73 | 1566 | hypothetical protein OsI_03222 [Oryza sativa Indica Group] |
| GenBank | EEC71251.1 | 9e-28 | 1569 | 1708 | 1565 | 1704 | hypothetical protein OsI_03222 [Oryza sativa Indica Group] |
| RefSeq | XP_002458298.1 | 0 | 194 | 1379 | 1 | 1186 | hypothetical protein SORBIDRAFT_03g030800 [Sorghum bicolor] |
| RefSeq | XP_002517915.1 | 0 | 1 | 1706 | 72 | 1767 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
