Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G092500.2 |
Family | GT48 |
Protein Properties | Length: 1951 Molecular Weight: 225796 Isoelectric Point: 9.442 |
Chromosome | Chromosome/Scaffold: 04 Start: 13038255 End: 13059975 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 1053 | 1805 | 0 |
VPSNIDARRRISFFSNSLFMDMPAAPKVRNMLSFSVLTPYYTEEVLFSLQELEEPNEDGVSILFYLQKIFPDEWNNFLERVERNNEEELKESPELQEKLR LWASYRGQTLTRTVRGMMYYREALELQAFLDMAKHEDLMEGYKAIELNTEDSKENRSLKAQCEAVADMKFTYVVSCQQYGIQKRSGSERAQDILRLMTKY PSLRVAYIDEIEQRSEDRSKKLNGKVNYFSVLVRAVPKSIDSSEQNLDQEIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMR NLLQEFLKKHDGVRYPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNSTL REGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTVGFYFSTLVTVLTVYVFLYGRLYLVLSGLEQELSQEP AIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRPTGRGFVVFHAKFAENYRLY SRSHFVKGIEMMILLIVYQIFGHTYRSTVAYVLITASLWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWINNRGGIGVPSEKSWESWWEEEQEHLQY SGKRGIIAEILLALRFFIYQYGLVYHLHVTRKTKSFLVYGASWLVIVLILFVM |
Full Sequence |
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Protein Sequence Length: 1951 Download |
MSSSRGSDQS QPMRRITRTQ TAGNLGETAF DSEVVPSSLS EIAPILRVAN EVESSNPRVA 60 YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENDP TLQGRVKKSD AREMQSFYQH 120 YYKKYIQALT NAADKADRAQ LTKAYQTANV LFEVLKAVNL TQAIEVDREI LEAQDRVAEQ 180 TQILVPYNIL PLDPDSANQA IMQYPEIQAA VYALRNTRGL PWPSDHKRKK DEDILDWLQE 240 MFGFQKDNVA NQREHLILLL ANVHIRQFPK PDQQPKLDDH ALTEVMKKLF KNYKKWCKYL 300 DRKSSLWLPT IQQEVQQRKL LYMGLYLLIW GEAANLRFMP ECLCYIYHHM AFELYGMLAG 360 NVSPLTGENI QPAYGGEEEA FLKKVVTPIY EVIRREAERS KRGKSKHSQW RNYDDLNEYF 420 WSVDCFRLGW PMRADADFFC LPTEQLVEKN GDNKPPATRD RWVGKVNFVE IRSFWHVFRS 480 FDRMWSFFIL CLQVMIIVAW NGNGQPSSIF TGDVFKKVLS VFITAAILKL GQAVLDVILS 540 WKAQQSMSFH VKLRYILKVV SAAAWVIVLP VTYAYTSDNP SGIARTIQSW FGSASSSPSL 600 FILAVVIYLS PNMLAAILFL FPFVRRFLES SHYKIVMLMM WWSQPRLYVG RGMHESTFSL 660 FKYTMFWVLL IITKLAFSYY IEIKPLVGPT KAIMSVRIRH FQWHEFFPQA RNNIGVVIAL 720 WAPIILVYFM DTQIWYAIFS TLFGGIYGAF RRLGEIRTLG MLRSRFESLP GAFNARLIPG 780 DKSEKKKKGF WLFFSRSFGQ PRSNKEKEAA KFAQLWNKII SSFREEDLIS NKEMNLLLVP 840 YWADRDLDEI QWPPFLLASK IPIALDMAKD SDSRDRELQK RIEADPYMFC AIRECYASFR 900 SIIRFLVEGL REKRVIDDIF SKVDKRIADG SLIKTYRMSA LPSLYDHIVK LIKLLLENKQ 960 DERGQVVLCF QDMLEIVTKD IMADEEFSSL EHGGSGHDGM IDPLHQLFDT KKLDQLFAST 1020 GAIEFPTPVS EAWREKINRL YLLLTTKESA MDVPSNIDAR RRISFFSNSL FMDMPAAPKV 1080 RNMLSFSVLT PYYTEEVLFS LQELEEPNED GVSILFYLQK IFPDEWNNFL ERVERNNEEE 1140 LKESPELQEK LRLWASYRGQ TLTRTVRGMM YYREALELQA FLDMAKHEDL MEGYKAIELN 1200 TEDSKENRSL KAQCEAVADM KFTYVVSCQQ YGIQKRSGSE RAQDILRLMT KYPSLRVAYI 1260 DEIEQRSEDR SKKLNGKVNY FSVLVRAVPK SIDSSEQNLD QEIYRIKLPG PAILGEGKPE 1320 NQNHAIIFTR GEGLQTIDMN QDNYMEEALK MRNLLQEFLK KHDGVRYPTI LGLREHIFTG 1380 SVSSLAWFMS NQETSFVTIG QRLLANPLKV RFHYGHPDVF DRLFHLTRGG VSKASKVINL 1440 SEDIFAGFNS TLREGNVTHH EYIQVGKGRD VGLNQISMFE AKIANGNGEQ TLSRDIYRLG 1500 HRFDFFRMLS CYFTTVGFYF STLVTVLTVY VFLYGRLYLV LSGLEQELSQ EPAIRDNKPL 1560 QVALASQSFV QIGFLMALPM LMEIGLERGF RTALSEFILM QLQLAPVFFT FSLGTKTHYY 1620 GRTLLHGGAK YRPTGRGFVV FHAKFAENYR LYSRSHFVKG IEMMILLIVY QIFGHTYRST 1680 VAYVLITASL WFMVGTWLFA PFLFNPSGFE WQKIVDDWTD WNKWINNRGG IGVPSEKSWE 1740 SWWEEEQEHL QYSGKRGIIA EILLALRFFI YQYGLVYHLH VTRKTKSFLV YGASWLVIVL 1800 ILFVMKTVSV GRRKFSASYQ LVFRLIKGLI FLTFLSILVI LVTLAHMTIQ DIIVCIFIFM 1860 PTGWGMLLIA QALRPVVKKA GFWGSVRTLA RGYEIVMGLL LFTPVAFLAW FPFVSEFQTR 1920 MLFNQAFSRG LQISRILGGH RKDRTSRHKE * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04652 | DUF605 | 5.0e-10 | 42 | 156 | 124 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
pfam14288 | FKS1_dom1 | 2.0e-59 | 317 | 433 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 1053 | 1811 | 835 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI16456.1 | 0 | 1 | 1950 | 1 | 1948 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | Q9LXT9 | 0 | 1 | 1950 | 1 | 1964 | CALS3_ARATH RecName: Full=Callose synthase 3; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 12 |
RefSeq | XP_002283298.1 | 0 | 1 | 1950 | 1 | 1947 | PREDICTED: similar to Callose synthase 3 [Vitis vinifera] |
RefSeq | XP_002299147.1 | 0 | 11 | 1950 | 16 | 1940 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528124.1 | 0 | 2 | 1950 | 3 | 1955 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2lxm_A | 0.004 | 46 | 155 | 21 | 128 | B Chain B, Lip5-chmp5 |
PDB | 2lxl_A | 0.006 | 46 | 155 | 21 | 128 | A Chain A, Lip5(mit)2 |