| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma18g53823.1 |
| Family | GT48 |
| Protein Properties | Length: 1959 Molecular Weight: 225536 Isoelectric Point: 9.5094 |
| Chromosome | Chromosome/Scaffold: 18 Start: 62079452 End: 62111100 |
| Description | glucan synthase-like 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT48 | 1059 | 1814 | 0 |
| VPSNLEARRRISFFSNSLFMDMPMAPKVRNMLSFSVLTPYYTEEVLFSLNDLDSQNEDGVSILFYLQKIFPDEWNNFLERVNSTEEDIKGSESDELVEEL RLWASYKGQTLTRTVRGMMYYRKALELQAFLDMAKDEDLMEGYKAMENSDDNSRGERSLWTQCQAVADMKFTYVVSCQQYGIDKRSGSPRAQDILRLMTR YPSLRVAYIDEVEEPVKDSKKKINKVYYSCLVKAMPKSNIPSEPERNLDQIIYKIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKM RNLLQEFLKKHDGVRFPSILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKVINLSEDIFAGFNST LREGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDVYRLGHRFDFFRMLSCYFTTVGFYFSTLITVLTVYVFLYGRLYLVLSGLEEGLSTQ KAIRDNKPLQVALASQSFVQIGVLMALPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYFGRTLLHGGAKYRPTGRGFVVFHAKFADNYRL YSRSHFVKGIELMILLVVYQIFGHSYRSTVAYILITASMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEEEQEHLQ YSGMRGIIVEILLSLRFFIYQYGLVYHLNITKKGPKSFLVYGISWLVIFVILFVMK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1959 Download |
| MSSSRGGAGP SSEAPPPRRI MRTQTAGNLG ESVIDSEVVP SSLVEIAPIL RVANEVEKTH 60 PRVAYLCRFY AFEKAHRLDP NSSGRGVRQF KTALLQRLER ENDPTLKGRV KKSDAREMQS 120 FYQHYYKKYI QALQNAADKA DRAQLTKAYN TANVLFEVLK AVNMTQSMEV DREILETQDK 180 VAEKTEILVP YNILPLDPDS ANQAIMRFPE IQAAVYALRN TRGLPWPKDY KKKKDEDILD 240 WLGSMFGFQK HNVANQREHL ILLLANVHIR QFPKPDQQPK LDERALTEVM KKLFKNYKKW 300 CKYLGRKSSL WLPTIQQEVQ QRKLLYMGLY LLIWGEAANL RFMPECLCYI YHHMAFELYG 360 MLAGNVSPMT GENVKPAYGG EEEAFLRKVV TPIYNVIAKE AARSKKGRSK HSQWRNYDDL 420 NEYFWSADCF RVGWPMRADA DFFCLPAEKL VFDKSNDDKP PSRDRWVGKV NFVEIRSFWH 480 MFRSFDRMWS FFILCLQAMI IVAWNGSGDP SAIFNGDVFK KALSVFITAA ILKFGQAVLD 540 VILSWKAQQS MSLYVKLRYI LKVVSAAAWV IVLSVTYAYT WDNPPGFAQT IKSWFGSGGS 600 SSPSLFILAV VVYLSPNMLA AIFFLIPFIR RHLERSNYRI VMLMMWWSQP RLYVGRGMHE 660 SAFSLFKYTM FWILLIITKL AFSYYIEIKP LVGPTKAIMS VKITIFQWHE FFPHARNNIG 720 VVIALWAPII LVYFMDTQIW YAIFSTLFGG VYGAFRRLGE IRTLGMLRSR FQSLPGAFNA 780 SLIPEETNEP KKKGLKATLS RRFPEISSNK GKEAARFAQL WNQIITSFRD EDLIDDREMN 840 LLLVPYWADT QLDLIQWPPF LLASKIPIAL DMAKDSNGKD RELKKRIAAD NYMSCAVREC 900 YASFKSIIKH LVQGEREIPV IEYMFNEVDK HIESDKLISE FKMSALPILY GQFVELIQYL 960 LTNDPKDRDR VVLLFQDMLE VVTRDIMMED QDQIFSLVDS SHGGTGHEGM LHLEPEPHHQ 1020 LFASEGAIKF PIEPLTAAWT EKIKRLHLLL TTKESAMDVP SNLEARRRIS FFSNSLFMDM 1080 PMAPKVRNML SFSVLTPYYT EEVLFSLNDL DSQNEDGVSI LFYLQKIFPD EWNNFLERVN 1140 STEEDIKGSE SDELVEELRL WASYKGQTLT RTVRGMMYYR KALELQAFLD MAKDEDLMEG 1200 YKAMENSDDN SRGERSLWTQ CQAVADMKFT YVVSCQQYGI DKRSGSPRAQ DILRLMTRYP 1260 SLRVAYIDEV EEPVKDSKKK INKVYYSCLV KAMPKSNIPS EPERNLDQII YKIKLPGPAI 1320 LGEGKPENQN HAIIFTRGEG LQTIDMNQDN YMEEALKMRN LLQEFLKKHD GVRFPSILGL 1380 REHIFTGSVS SLAWFMSNQE TSFVTIGQRL LANPLKVRFH YGHPDVFDRL FHLTRGGVSK 1440 ASKVINLSED IFAGFNSTLR EGNVTHHEYI QVGKGRDVGL NQISMFEAKI ANGNGEQTLS 1500 RDVYRLGHRF DFFRMLSCYF TTVGFYFSTL ITVLTVYVFL YGRLYLVLSG LEEGLSTQKA 1560 IRDNKPLQVA LASQSFVQIG VLMALPMLME IGLERGFRTA LSEFILMQLQ LAPVFFTFSL 1620 GTKTHYFGRT LLHGGAKYRP TGRGFVVFHA KFADNYRLYS RSHFVKGIEL MILLVVYQIF 1680 GHSYRSTVAY ILITASMWFM VGTWLFAPFL FNPSGFEWQK IVDDWTDWNK WISNRGGIGV 1740 PPEKSWESWW EEEQEHLQYS GMRGIIVEIL LSLRFFIYQY GLVYHLNITK KGPKSFLVYG 1800 ISWLVIFVIL FVMKTVSVGR RKFSANFQLV FRLIKGMIFL TFVSILVILI ALPHMTVLDI 1860 VVCILAFMPT GWGMLQIAQA LKPVVRRAGF WGSVKTLARG YEIVMGLLLF TPVAFLAWFP 1920 FVSEFQTRML FNQAFSRGLQ ISRILGGQRK ERSSRNKE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04652 | DUF605 | 5.0e-9 | 46 | 160 | 120 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 5.0e-58 | 321 | 437 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1059 | 1810 | 832 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16456.1 | 0 | 3 | 1958 | 2 | 1948 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | Q9LXT9 | 0 | 1 | 1958 | 1 | 1964 | CALS3_ARATH RecName: Full=Callose synthase 3; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 12 |
| RefSeq | XP_002283298.1 | 0 | 3 | 1958 | 2 | 1947 | PREDICTED: similar to Callose synthase 3 [Vitis vinifera] |
| RefSeq | XP_002299147.1 | 0 | 1 | 1958 | 1 | 1940 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528124.1 | 0 | 3 | 1958 | 2 | 1955 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lxm_A | 0.003 | 50 | 159 | 21 | 128 | B Chain B, Lip5-chmp5 |
| PDB | 2lxl_A | 0.003 | 50 | 159 | 21 | 128 | A Chain A, Lip5(mit)2 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |
