Browse dbCAN-PUL Entries

PULID Characterization Method(s) Substrate Organism Publication Publish Date Type Num Genes Num CAZymes CazyFamily
PUL0030 isothermal calorimetric titration, gene deletion mutant and growth assay, enzyme activity assay mannan Bacillus sp. N16-5 26978267, 30351049
A Novel Manno-Oligosaccharide Binding Protein Identified in Alkaliphilic Bacillus sp. N16-5 Is Involved in Mannan Utilization. Galactomannan Degrading Enzymes from the Mannan Utilization Gene Cluster of Alkaliphilic Bacillus sp. N16-5 and Their Synergy on Galactomannan Degradation. PLoS One. 2016 Mar 15;11(3):e0150059. doi: 10.1371/journal.pone.0150059. eCollection 2016. J Agric Food Chem. 2018 Oct 24;66(42):11055-11063. doi: 10.1021/acs.jafc.8b03878. Epub 2018 Oct 15.
2016,2018 Oct 24 degradation 12 7 GH130, GH130, GH27, CE7
PUL0129 enzyme activity assay mannan gut metagenome 30356154
Interspecies cross-feeding orchestrates carbon degradation in the rumen ecosystem. Nat Microbiol. 2018 Nov;3(11):1274-1284. doi: 10.1038/s41564-018-0225-4. Epub 2018 Oct 24.
2018 Nov degradation 12 6 GH5, GH5_4, GH26, GH26, GH5, GH5_4, CE7, CE7, GH26, GH130
PUL0185 isothermal calorimetric titration, gene deletion mutant and growth assay mannan Bacillus sp. N16-5 26978267
A Novel Manno-Oligosaccharide Binding Protein Identified in Alkaliphilic Bacillus sp. N16-5 Is Involved in Mannan Utilization. PLoS One. 2016 Mar 15;11(3):e0150059. doi: 10.1371/journal.pone.0150059. eCollection 2016.
2016 degradation 12 6 GH130, GH130, GH27, CE7
PUL0293 RT-qPCR, gene deletion mutant and growth assay mannan Bacillus sp. N16-5 29360976
Transcriptional regulation of the mannan utilization genes in the alkaliphilic Bacillus sp. N16-5. FEMS Microbiol Lett. 2018 Feb 1;365(4). pii: 4816728. doi: 10.1093/femsle/fnx280.
2018 Feb 1 degradation 12 7 GH130, GH130, GH27, CE7
PUL0391 microarray cellulose, xylan, xyloglucan, pectin, mannan Caldicellulosiruptor bescii 21227922
Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725. Nucleic Acids Res. 2011 Apr;39(8):3240-54. doi: 10.1093/nar/gkq1281. Epub 2011 Jan 11.
2011 Apr degradation 15 10 PL11, CBM35, GH12, CBM3, CBM2, CE12, PL3_1, PL3, CBM66, PL9_1, CBM35, CBM66, PL9, CBM22, GH12, CBM0, CBM3, CBM2, CBM1, GH48, GH10, CBM9, GH44, CBM35, GH12, CBM44, CBM3, CBM2, CBM76, CBM10, GH5, GH5_8, CBM35, GH12, CBM5, CBM3, CBM2, GH74, CBM1, GH48, GT39, CBM3, GH9, GH5_8, CBM3, GH5_1, GH5_8, CBM3, GH48, GH9
PUL0408 enzyme activity assay, thin layer chromatography mannan Bacteroides fragilis 24217874
The mannobiose-forming exo-mannanase involved in a new mannan catabolic pathway in Bacteroides fragilis. Arch Microbiol. 2014 Jan;196(1):17-23. doi: 10.1007/s00203-013-0938-y. Epub 2013 Nov 12.
2014 Jan degradation 4 2 GH26, GH130