Browse dbCAN-PUL Entries

PULID Characterization Method(s) Substrate Organism Publication Publish Date Type Num Genes Num CAZymes CazyFamily
PUL0208 growth assay chitin Pseudoalteromonas luteoviolacea 31213521
Marine Chitinolytic Pseudoalteromonas Represents an Untapped Reservoir of Bioactive Potential. mSystems. 2019 Jun 18;4(4). pii: 4/4/e00060-19. doi: 10.1128/mSystems.00060-19.
2019 Jun 18 degradation 3 3 CBM5, GH18, CBM5, AA10, CBM5, GH18
PUL0269 RT-PCR chitin Haloferax mediterranei 23674154
Characterization of genes for chitin catabolism in Haloferax mediterranei. Appl Microbiol Biotechnol. 2014 Feb;98(3):1185-94. doi: 10.1007/s00253-013-4969-8. Epub 2013 May 15.
2014 Feb degradation 16 4 GH3, CBM5, CBM5, GH18, CBM5, GH18
PUL0307 enzyme activity assay chitin Serratia marcescens subsp. marcescens 29229757, 8757722
Structure and activity of ChiX: a peptidoglycan hydrolase required for chitinase secretion by Serratia marcescens. Comparative studies of chitinases A and B from Serratia marcescens. Biochem J. 2018 Jan 23;475(2):415-428. doi: 10.1042/BCJ20170633. Microbiology (Reading). 1996 Jul;142 ( Pt 7):1581-9. doi: 10.1099/13500872-142-7-1581.
2018 Jan 23,1996 Jul degradation 6 2 CBM5, GH18, AA10
PUL0391 microarray cellulose, xylan, xyloglucan, pectin, mannan Caldicellulosiruptor bescii 21227922
Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725. Nucleic Acids Res. 2011 Apr;39(8):3240-54. doi: 10.1093/nar/gkq1281. Epub 2011 Jan 11.
2011 Apr degradation 15 10 PL11, CBM35, GH12, CBM3, CBM2, CE12, PL3_1, PL3, CBM66, PL9_1, CBM35, CBM66, PL9, CBM22, GH12, CBM0, CBM3, CBM2, CBM1, GH48, GH10, CBM9, GH44, CBM35, GH12, CBM44, CBM3, CBM2, CBM76, CBM10, GH5, GH5_8, CBM35, GH12, CBM5, CBM3, CBM2, GH74, CBM1, GH48, GT39, CBM3, GH9, GH5_8, CBM3, GH5_1, GH5_8, CBM3, GH48, GH9
PUL0442 mass spectrometry, high performance anion exchange chromatography glucomannan, galactomannan, glucose Chitinophaga pinensis 28069559
Proteomic insights into mannan degradation and protein secretion by the forest floor bacterium Chitinophaga pinensis. J Proteomics. 2017 Mar 6;156:63-74. doi: 10.1016/j.jprot.2017.01.003. Epub 2017 Jan 6.
2017 Mar 6 degradation 9 3 CBM5, GH18, GH18, GH64, CBM6, GH16, CBM6
PUL0444 mass spectrometry, high performance anion exchange chromatography glucomannan, galactomannan, glucose Chitinophaga pinensis 28069559
Proteomic insights into mannan degradation and protein secretion by the forest floor bacterium Chitinophaga pinensis. J Proteomics. 2017 Mar 6;156:63-74. doi: 10.1016/j.jprot.2017.01.003. Epub 2017 Jan 6.
2017 Mar 6 degradation 6 2 GH31, GH19, CBM5
PUL0497 clone and expression, enzyme activity assay chitin Pseudoalteromonas piscicida 11772635
Identification and characterization of the gene cluster involved in chitin degradation in a marine bacterium, Alteromonas sp. strain O-7. Appl Environ Microbiol. 2002 Jan;68(1):263-70. doi: 10.1128/aem.68.1.263-270.2002.
2002 Jan degradation 3 2 CBM5, GH18, CBM5, AA10, CBM5, GH18
PUL0567 clone and expression, enzyme activity assay chitin Pseudoalteromonas sp. S9 10220172
Multiple genes involved in chitin degradation from the marine bacterium Pseudoalteromonas sp. strain S91. Microbiology (Reading). 1999 Apr;145 ( Pt 4):925-934. doi: 10.1099/13500872-145-4-925.
1999 Apr degradation 3 3 CBM5, GH18, AA10, CBM5, CBM5, GH18