y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10027988 |
Family | AA2 |
Protein Properties | Length: 208 Molecular Weight: 21950.6 Isoelectric Point: 4.2924 |
Chromosome | Chromosome/Scaffold: 132 Start: 202505 End: 204160 |
Description | peroxidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 18 | 171 | 3.1e-24 |
TLANSELPPPFFTVDQLKATFSAVGLNTTVDLVALSGAHTFGRAQCGSFINRLYNFNGTGSPDPTVNATYLQTLQQLCPQNGTATVLANLDRSTADGFDS TYFANLQTQEGPLDSDQALFSTPNSDTIALVNTFCVNRTAFFESFVNSMIRMGN |
Full Sequence |
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Protein Sequence Length: 208 Download |
METGSSLTML DSVAANRTLA NSELPPPFFT VDQLKATFSA VGLNTTVDLV ALSGAHTFGR 60 AQCGSFINRL YNFNGTGSPD PTVNATYLQT LQQLCPQNGT ATVLANLDRS TADGFDSTYF 120 ANLQTQEGPL DSDQALFSTP NSDTIALVNT FCVNRTAFFE SFVNSMIRMG NILPPVGTSG 180 EIRLNFRVIN PAASGTAVIT TPAGFVC* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 2.0e-10 | 11 | 57 | 47 | + Peroxidase. | ||
cd00314 | plant_peroxidase_like | 9.0e-12 | 10 | 171 | 165 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
PLN03030 | PLN03030 | 4.0e-31 | 22 | 183 | 167 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 2.0e-74 | 10 | 189 | 180 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB47602.1 | 0 | 11 | 193 | 152 | 334 | peroxidase [Linum usitatissimum] |
GenBank | ABK94318.1 | 0 | 11 | 201 | 162 | 352 | unknown [Populus trichocarpa] |
DDBJ | BAF33314.1 | 0 | 7 | 201 | 125 | 319 | peroxidase [Populus alba] |
EMBL | CAA66037.1 | 0 | 11 | 201 | 153 | 343 | peroxidase [Populus trichocarpa] |
RefSeq | XP_002534437.1 | 0 | 11 | 190 | 78 | 257 | Peroxidase C3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 4 | 190 | 115 | 304 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 1pa2_A | 0 | 4 | 190 | 115 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1gx2_B | 0 | 11 | 190 | 126 | 306 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1gx2_A | 0 | 11 | 190 | 126 | 306 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 3atj_B | 0 | 11 | 190 | 126 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG037532 | 201 | 7 | 206 | 0 |
JG036422 | 198 | 10 | 206 | 0 |
JG186243 | 201 | 7 | 206 | 0 |
EE284451 | 184 | 15 | 198 | 0 |
GO528437 | 185 | 11 | 195 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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