Browse dbCAN-PUL Entries

PULID Characterization Method(s) Substrate Organism Publication Publish Date Type Num Genes Num CAZymes CazyFamily
PUL0040 Northern Blot, enzyme activity assay cellulose Ruminiclostridium cellulolyticum 12896991, 1398087, 11844767
A rhamnogalacturonan lyase in the Clostridium cellulolyticum cellulosome. Sequence analysis of a gene cluster encoding cellulases from Clostridium cellulolyticum. Cel9M, a new family 9 cellulase of the Clostridium cellulolyticum cellulosome. J Bacteriol. 2003 Aug;185(16):4727-33. doi: 10.1128/JB.185.16.4727-4733.2003. Gene. 1992 Sep 21;119(1):17-28. doi: 10.1016/0378-1119(92)90062-t. J Bacteriol. 2002 Mar;184(5):1378-84. doi: 10.1128/JB.184.5.1378-1384.2002.
2003 Aug,1992 Sep 21,2002 Mar degradation 6 6 GH9, CBM3, GH9, CBM3, GH5_17, GH9, PL11_1, PL11, GH5_1, GH5
PUL0083 label-free quantitative proteomics, functional enrichment analysis, enzyme activity assay lignocellulose Ruminiclostridium papyrosolvens 31338125
Secretomic analyses of Ruminiclostridium papyrosolvens reveal its enzymatic basis for lignocellulose degradation. Biotechnol Biofuels. 2019 Jul 15;12:183. doi: 10.1186/s13068-019-1522-8. eCollection 2019.
2019 degradation 12 10 cohesin, CBM3, GH48, GH8, CBM3, GH9, CBM4, CBM30, GH9, CBM3, GH9, CBM3, GH9, GH5_17, GH9, GH5_7, GH5_1
PUL0385 ion trap liquid chromatography, mass spectrometry, target decoy database analysis, high performance anion exchange chromatography cellulose Ruminiclostridium cellulolyticum 20013800
Modulation of cellulosome composition in Clostridium cellulolyticum: adaptation to the polysaccharide environment revealed by proteomic and carbohydrate-active enzyme analyses. Proteomics. 2010 Feb;10(3):541-54. doi: 10.1002/pmic.200900311.
2010 Feb degradation 12 10 GH48, GH8, GH9, CBM3, CBM4, GH9, CBM30, GH9, CBM3, GH9, CBM3, GH5_17, GH9, PL11_1, PL11, GH5_1
PUL0434 SDS-PAGE, Western Blot mannooligosaccharide Clostridium cellulovorans 10613891
The engL gene cluster of Clostridium cellulovorans contains a gene for cellulosomal manA. J Bacteriol. 2000 Jan;182(1):244-7. doi: 10.1128/JB.182.1.244-247.2000.
2000 Jan degradation 8 2 CBM30, CBM4, GH9, GH9, GH5_17, CBM4, GH9, CBM4