| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s29_318V6.1 |
| Family | CE8 |
| Protein Properties | Length: 440 Molecular Weight: 47674.3 Isoelectric Point: 8.1334 |
| Chromosome | Chromosome/Scaffold: 29 Start: 2360624 End: 2362166 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 367 | 439 | 9.8e-21 |
| PKNTGLSFQNCVVDAASELKNLQNQTVNCYLGRPWNEFSRTVFLMSTLTNGINPEGWLPWNGALFLNTVFYGE | |||
| CE8 | 198 | 287 | 3.2e-22 |
| AVVAKDGYGEYHIIQETIDAAPKDIAMQWVIRIKAGVYNEYVEVPKSVKNLVILGDGVDQSVVGYYVTTFATATMAVLGEHFIGRDFTVR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 440 Download |
| MATLIFVMEA GVMGSVVAQA IPEMVEWMCA AAHDRASCVT SLAAHPDAAA SVPRGLATIA 60 ITNGLEGVGS FYTFTRGLTT SNGPGEKSAL STCRSFQQGS QDPLQLSLSN MATLNPWRFK 120 EQITDSWTWL STALTYHTTC LDGMNDGIVG NTMRDAVMAR GASVTSLLSN AVSLVWIRLK 180 DRKLLQSRNT NDITIVNAVV AKDGYGEYHI IQETIDAAPK DIAMQWVIRI KAGVYNEYVE 240 VPKSVKNLVI LGDGVDQSVV GYYVTTFATA TMAVLGEHFI GRDFTVRWRS RSRAISAHSG 300 DVLSRGTKTH STLTATGNFI RAAGSSAQWI SFSAMLPPSF SPALYWLVHH SLSNKTPSQP 360 KVGPPAPKNT GLSFQNCVVD AASELKNLQN QTVNCYLGRP WNEFSRTVFL MSTLTNGINP 420 EGWLPWNGAL FLNTVFYGE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 7.0e-40 | 38 | 439 | 468 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 3.0e-42 | 28 | 439 | 484 | + pectinesterase | ||
| PLN02468 | PLN02468 | 1.0e-45 | 18 | 439 | 480 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 2.0e-46 | 88 | 439 | 418 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 6.0e-52 | 22 | 439 | 476 | + pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF23892.1 | 0 | 70 | 439 | 110 | 522 | AF152172_1 pectin methyl esterase [Solanum tuberosum] |
| RefSeq | XP_001757759.1 | 0 | 1 | 175 | 77 | 251 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001765495.1 | 0 | 193 | 439 | 10 | 273 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002302526.1 | 0 | 69 | 439 | 75 | 460 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002320714.1 | 2.8026e-45 | 125 | 439 | 121 | 460 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 9e-38 | 197 | 439 | 8 | 265 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 5e-30 | 195 | 439 | 2 | 261 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
