| Basic Information | |
|---|---|
| Species | Phaseolus vulgaris |
| Cazyme ID | Phvul.004G101900.1 |
| Family | PL1 |
| Protein Properties | Length: 237 Molecular Weight: 27593 Isoelectric Point: 8.6859 |
| Chromosome | Chromosome/Scaffold: 04 Start: 30456030 End: 30458170 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| PL1 | 49 | 155 | 2.5e-24 |
| SDDPITQTKHLKIDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHFEPNCNQSNFYQGWLQYGIGRSMERSLKS EANPFVA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 237 Download |
| MNVIDRCWGQ NPEWWRHQSQ LAISFVTCAC KMINNIGNDL IHYKVSHSSD DPITQTKHLK 60 IDHNTLYDCQ DGLFDVTRGS TDVTISNNWF KNQDKVMLLG HDDRYVRDET MKVTVVYNHF 120 EPNCNQSNFY QGWLQYGIGR SMERSLKSEA NPFVAPTIGN KEVTWRKGND KNEDKWKFHS 180 IRDVFENGPY FNVTKGGDVK KLNDSKERNF KVVDAKFVRF ITHSSGVLRY NKHSIY* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 2.0e-12 | 49 | 153 | 132 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| pfam00544 | Pec_lyase_C | 1.0e-20 | 53 | 153 | 122 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| smart00656 | Amb_all | 5.0e-25 | 53 | 156 | 126 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26401.1 | 0 | 28 | 234 | 97 | 318 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002267384.1 | 0.00000006 | 1 | 53 | 19 | 71 | PREDICTED: similar to putative Cup s 1 pollen allergen [Vitis vinifera] |
| RefSeq | XP_002267384.1 | 0 | 28 | 234 | 146 | 367 | PREDICTED: similar to putative Cup s 1 pollen allergen [Vitis vinifera] |
| RefSeq | XP_002304865.1 | 0.000000009 | 1 | 53 | 1 | 53 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304865.1 | 0 | 36 | 234 | 137 | 350 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 5e-33 | 61 | 228 | 163 | 345 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 5e-33 | 61 | 228 | 163 | 345 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 3zsc_A | 0.0002 | 41 | 189 | 98 | 300 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DT575750 | 182 | 61 | 229 | 0 |
| FG478648 | 200 | 49 | 234 | 0 |
| FG474249 | 196 | 53 | 234 | 0 |
| FG470156 | 172 | 44 | 199 | 0 |
| FG468635 | 172 | 44 | 199 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |