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capsule polysaccharide degradation
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Capsule polysaccharide, typically composed of repeating monosaccharides joined by glycosidic linkages, is commonly found on the bacteria cell surface as a capsule structure layer. It is located outside the outer membrane of gram-negative cells and the peptidoglycan layer of gram-positive cells.
References
Reckseidler-Zenteno, S. L. (2012). Capsular Polysaccharides Produced by the Bacterial Pathogen Burkholderia pseudomallei. In (Ed.), The Complex World of Polysaccharides. IntechOpen. Click here to redirect detail information.
Roberts I. S. (1996). The biochemistry and genetics of capsular polysaccharide production in bacteria. Annual review of microbiology, 50, 285–315. Click here to redirect detail information.
CAZyme Gene Cluster:
| Substrate | Genome_ID | CGC_ID | CGC_Content | PUL_ID | Species Name |
|---|---|---|---|---|---|
| capsule polysaccharide degradation | MGYG000000005 | MGYG000000005_4|CGC5 |
2.A.38.4.5,null,PL0|PL12,null,GT0,9.B.18.1.2,8.A.3.3.4
|
PUL0248 | Terrisporobacter glycolicus |
| capsule polysaccharide degradation | MGYG000000013 | MGYG000000013_16|CGC2 |
GH31,GH66,null,8.A.46.1.5,1.B.14.6.1,null,null,PL37
|
PUL0205 | Bacteroides sp902362375 |
| capsule polysaccharide degradation | MGYG000000029 | MGYG000000029_9|CGC2 |
1.B.14.6.1,8.A.46.1.3,null,GH66,GH31
|
PUL0205 | Bacteroides finegoldii |
| capsule polysaccharide degradation | MGYG000000043 | MGYG000000043_32|CGC1 |
3.A.1.27.4,3.A.1.27.2,1.B.42.1.2,null,8.A.46.1.1,1.B.14.6.1,GH97,GH13
|
PUL0204 | Phocaeicola sp900066455 |
| capsule polysaccharide degradation | MGYG000000105 | MGYG000000105_3|CGC11 |
GH31,null,1.B.14.6.1
|
PUL0205 | Bacteroides clarus |
| capsule polysaccharide degradation | MGYG000000119 | MGYG000000119_19|CGC1 |
GH31,9.B.28.1.2,GH31,GH31,3.A.1.1.6,3.A.1.1.44,SBP_bac_1,HTH_AraC+HTH_AraC,8.A.59.2.1
|
PUL0205 | Blautia sp000432195 |
| capsule polysaccharide degradation | MGYG000000123 | MGYG000000123_6|CGC6 |
4.D.1.3.3,null,GntR,3.A.1.132.6,null,null,GH31,9.B.28.1.8,GH31,GH31,3.A.1.1.6,3.A.1.1.19,SBP_bac_1,HTH_AraC+HTH_AraC,8.A.59.2.1
|
PUL0205 | Blautia sp001304935 |
| capsule polysaccharide degradation | MGYG000000158 | MGYG000000158_1|CGC1 |
PL0|PL12,null,9.B.18.1.3
|
PUL0248 | Collinsella sp003436275 |
| capsule polysaccharide degradation | MGYG000000196 | MGYG000000196_15|CGC4 |
GH51,null,GH43,null,GH2,null,1.B.14.6.1,8.A.46.1.5,null,GH66,GH31,GH31,null,null,CBM66|GH32|3.2.1.26|3.2.1.80|3.2.1.64|CBM38
|
PUL0205 | Bacteroides thetaiotaomicron |
| capsule polysaccharide degradation | MGYG000000196 | MGYG000000196_1|CGC2 |
GH13,GH97,1.B.14.6.1,8.A.46.1.1,null,null,GH13|GH13_36|CBM58
|
PUL0204 | Bacteroides thetaiotaomicron |
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