| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra023838 |
| Family | GH1 |
| Protein Properties | Length: 516 Molecular Weight: 58746 Isoelectric Point: 5.869 |
| Chromosome | Chromosome/Scaffold: 01 Start: 20334277 End: 20336960 |
| Description | thioglucoside glucohydrolase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 42 | 493 | 0 |
| SSFEKDFIFGLASSAYQAYKAGPDHGNGDTTCNSYSYWEKDIEVMDELKATGYRFSIAWSRIIPRGKRSRGVHQGGINYYHGLINGLIDKGITPLVTLFH WDLPQVLQDDYEGFLDPQIIDDFRDFADLCFEEYGDKVKHWFTINQLYSVPTRGYGLGSDAPGRCSPKVDSTCYAGNSSTEPYIVAHNQLLAHATVHQGG KIGPVMITRWFLPYNDTDPDSIAATERMKEFFLGWYMGPLTNGTYPQIMIDTVGERLPSFTPEESKLVKGSYDFLGLNYYFAQYVQPSPNHVDSDGHTAM MDAGTRLTYRNASNHAIGPVFTEHKDDETKNTYYYPKGIYYVMDHFKTNYNDPVIYITENGFSTSGDETREEAKFDYRRIDYLCSHLCFLSKVIKETGVK VKGYCAWSLGDNYEFGLGFTVRFGLTYIDWNNVTDRDLKESGKWYKKFIATK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 516 Download |
| MKHLWLTLAF LLALATCKAD EEITCEENLP FTCGQTDRFN SSSFEKDFIF GLASSAYQAY 60 KAGPDHGNGD TTCNSYSYWE KDIEVMDELK ATGYRFSIAW SRIIPRGKRS RGVHQGGINY 120 YHGLINGLID KGITPLVTLF HWDLPQVLQD DYEGFLDPQI IDDFRDFADL CFEEYGDKVK 180 HWFTINQLYS VPTRGYGLGS DAPGRCSPKV DSTCYAGNSS TEPYIVAHNQ LLAHATVHQG 240 GKIGPVMITR WFLPYNDTDP DSIAATERMK EFFLGWYMGP LTNGTYPQIM IDTVGERLPS 300 FTPEESKLVK GSYDFLGLNY YFAQYVQPSP NHVDSDGHTA MMDAGTRLTY RNASNHAIGP 360 VFTEHKDDET KNTYYYPKGI YYVMDHFKTN YNDPVIYITE NGFSTSGDET REEAKFDYRR 420 IDYLCSHLCF LSKVIKETGV KVKGYCAWSL GDNYEFGLGF TVRFGLTYID WNNVTDRDLK 480 ESGKWYKKFI ATKNLAKPNF LRSSLTFEKK KFADA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02849 | PLN02849 | 9.0e-93 | 36 | 503 | 496 | + beta-glucosidase | ||
| COG2723 | BglB | 7.0e-98 | 42 | 492 | 487 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN02814 | PLN02814 | 1.0e-98 | 36 | 490 | 486 | + beta-glucosidase | ||
| TIGR03356 | BGL | 1.0e-104 | 46 | 486 | 477 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 2.0e-158 | 40 | 493 | 483 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1DWA | 0 | 22 | 491 | 1 | 498 | M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1: Structure Prior To Irradiation |
| PDB | 1MYR | 0 | 20 | 491 | 1 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| DDBJ | BAE16356.1 | 0 | 1 | 515 | 1 | 545 | myrosinase [Eutrema wasabi] |
| EMBL | CAA79989.2 | 0 | 1 | 515 | 1 | 527 | myrosinase, thioglucoside glucohydrolase [Brassica napus] |
| Swiss-Prot | P29736 | 0 | 20 | 491 | 1 | 500 | MYRA_SINAL RecName: Full=Myrosinase MA1; AltName: Full=Sinigrinase; AltName: Full=Thioglucosidase |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1myr_A | 0 | 20 | 491 | 1 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 2wxd_M | 0 | 20 | 491 | 1 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1w9d_M | 0 | 20 | 491 | 1 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1w9b_M | 0 | 20 | 491 | 1 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| PDB | 1e73_M | 0 | 20 | 491 | 1 | 500 | A Chain A, Myrosinase From Sinapis Alba |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| glucosinolate breakdown | RXN-8134 | EC-3.2.1.147 | thioglucosidase |
| glucosinolate breakdown (via thiocyanate-forming protein) | RXN-12024 | EC-3.2.1.147 | thioglucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
