| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10003723m |
| Family | CE8 |
| Protein Properties | Length: 319 Molecular Weight: 35752.4 Isoelectric Point: 8.7426 |
| Chromosome | Chromosome/Scaffold: 5 Start: 4706100 End: 4707213 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 7 | 302 | 0 |
| DVIVAQDGSGNYTKISDAILAAPSFRRKPYYIKIKEGNYTEYVVVGREKTNLVLIGNGINNTIISGNKSHGKDHLSTYQTATVAIKVAGFVAMNITFENT AGPDQETGQAVELVSEVDSAFYRCKLDGYQDTLYAKSNKQFYRECDIYGTIDFIFGDASAVFQNCNIYVRFLGGNVKTITAEGREKPEGNGGIIIHNCTI TAAEDFSENRTSIKTYMGRPWRNYSRTVILQTFLDEIIDPEGWLEWQGQSVDTIYYAEYNNRGRGSKTTGRVRWKGFRIIKRLEAENFTVKKFISG | |||
| Full Sequence |
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| Protein Sequence Length: 319 Download |
| QITQRIDVIV AQDGSGNYTK ISDAILAAPS FRRKPYYIKI KEGNYTEYVV VGREKTNLVL 60 IGNGINNTII SGNKSHGKDH LSTYQTATVA IKVAGFVAMN ITFENTAGPD QETGQAVELV 120 SEVDSAFYRC KLDGYQDTLY AKSNKQFYRE CDIYGTIDFI FGDASAVFQN CNIYVRFLGG 180 NVKTITAEGR EKPEGNGGII IHNCTITAAE DFSENRTSIK TYMGRPWRNY SRTVILQTFL 240 DEIIDPEGWL EWQGQSVDTI YYAEYNNRGR GSKTTGRVRW KGFRIIKRLE AENFTVKKFI 300 SGNKWIPSTG IPIFPGLL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03043 | PLN03043 | 4.0e-107 | 8 | 318 | 317 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| PLN02201 | PLN02201 | 3.0e-107 | 7 | 317 | 315 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 2.0e-109 | 7 | 317 | 314 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 1.0e-118 | 8 | 318 | 317 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 9.0e-137 | 7 | 303 | 301 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACQ85264.1 | 0 | 3 | 317 | 249 | 564 | pectin methylesterase [Musa acuminata AAA Group] |
| DDBJ | BAF42040.1 | 0 | 8 | 312 | 251 | 558 | pectin methylesterase 3 [Pyrus communis] |
| RefSeq | XP_002320332.1 | 0 | 8 | 318 | 247 | 560 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511679.1 | 0 | 4 | 317 | 200 | 514 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002523113.1 | 0 | 5 | 317 | 243 | 556 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 7 | 317 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 7 | 317 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 8e-21 | 18 | 308 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 8e-21 | 18 | 308 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 9e-21 | 18 | 308 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778758 | 317 | 5 | 317 | 0 |
| HO852920 | 318 | 3 | 317 | 0 |
| GD253122 | 238 | 83 | 317 | 0 |
| EX282555 | 232 | 89 | 317 | 0 |
| EL463457 | 239 | 82 | 317 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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