CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00011489m
FamilyGH16
Protein PropertiesLength: 278 Molecular Weight: 31324.1 Isoelectric Point: 6.5109
ChromosomeChromosome/Scaffold: 083520 Start: 622 End: 1854
Descriptionxyloglucan endotransglucosylase/hydrolase 25
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16492042.4e-25
  LNLDRSSGPAGFNSKEQFLYGEFSIEMKLIRGNSAGTVSCFYLSSGTDDWRDEIDMEFMGNSSGQPVVLNTNVWANGDGKKEHQFDLWFDPSADYHTYTI
  IWNPENILFKVDNVFIRSFKRYADLPYPSSKPMTLHATLWDGSYWATEKGKVPVDW
Full Sequence
Protein Sequence     Length: 278     Download
MARRSLALLA VSLALLQVAS AARSWLTQFT TDGTVRTGYD AAGQKVMMLN LDRSSGPAGF    60
NSKEQFLYGE FSIEMKLIRG NSAGTVSCFY LSSGTDDWRD EIDMEFMGNS SGQPVVLNTN    120
VWANGDGKKE HQFDLWFDPS ADYHTYTIIW NPENILFKVD NVFIRSFKRY ADLPYPSSKP    180
MTLHATLWDG SYWATEKGKV PVDWNNAPFV VSYRSFYANA CVSGGACRAG SDGWMHRQLD    240
AAEWGTVRWA ERNYMRYNYC QDGWRFSQGL PAECSRN* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam06955XET_C5.0e-1622727451+
cd02175GH16_lichenase1.0e-1647191154+
pfam00722Glyco_hydro_166.0e-5943204163+
PLN03161PLN031611.0e-6647276242+
cd02176GH16_XET2.0e-11443274242+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG38167.101727719281xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
GenBankACN31920.102427726281unknown [Zea mays]
RefSeqNP_001105166.102427726280xyloglucan endo-transglycosylase/hydrolase [Zea mays]
RefSeqXP_002446422.102427727280hypothetical protein SORBIDRAFT_06g015880 [Sorghum bicolor]
RefSeqXP_002446425.102127720277hypothetical protein SORBIDRAFT_06g015930 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B04327735275X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa
PDB1un1_A04327735275X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa
PDB1umz_B04327735275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A04327735275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B04427437267A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Signal Peptide
Cleavage Site
21
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FL945578247252710
DV508848256252780
FL949394217252410
EE287470256252780
FL938597215252390
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00022766mPavirv00032512mPavirv00011651m
Pavirv00065073mPavirv00039266mPavirv00018963mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015880.1Sb06g015940.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny