Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10011618m |
Family | GT14 |
Protein Properties | Length: 412 Molecular Weight: 46595.7 Isoelectric Point: 8.5263 |
Chromosome | Chromosome/Scaffold: 1 Start: 18590456 End: 18591953 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 69 | 324 | 0 |
FAYLVSGSKGDLESLWRTLRALYHPRNQYIVHLDLESPVDERSELASRIKNDPMYSKIGNVYMIAKANLVTYTGPTMVANTLHACAILLKRNPDWDWFIN LSASDYPLVTQDDLLYTFSTLDRNLNFIEHTSNLGWKDKKRAMPLMIDPGLYMLNKSDVLWVSTKRSLPAAFKLFTGSAWMVLSHSFVEYIIWGWDNLPR TLLMYYTNFVSSPEGYFHTAICNAPEFSKTVVNHDLHYISWDMPPKQHPRVLSIRD |
Full Sequence |
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Protein Sequence Length: 412 Download |
MLLSHDHKWY VIMEKKCVFS FVITSLVCVV LFATSCNIGL MSSLRPPTNG TLSPSAKNDL 60 EANDQLPRFA YLVSGSKGDL ESLWRTLRAL YHPRNQYIVH LDLESPVDER SELASRIKND 120 PMYSKIGNVY MIAKANLVTY TGPTMVANTL HACAILLKRN PDWDWFINLS ASDYPLVTQD 180 DLLYTFSTLD RNLNFIEHTS NLGWKDKKRA MPLMIDPGLY MLNKSDVLWV STKRSLPAAF 240 KLFTGSAWMV LSHSFVEYII WGWDNLPRTL LMYYTNFVSS PEGYFHTAIC NAPEFSKTVV 300 NHDLHYISWD MPPKQHPRVL SIRDMGKMVA SGSAFGRKFR RNDSVLDTID KELLRRMNED 360 GFTPGGWCGG KPECSVVEDL ARIRPSAGAE RLKGTVDKLV TEAKSGKNQC V* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 3.0e-90 | 69 | 329 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 10 | 411 | 420 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF87858.1 | 0 | 13 | 411 | 1 | 406 | AC022520_2 Hypothetical protein [Arabidopsis thaliana] |
GenBank | AAK83637.1 | 0 | 10 | 410 | 3 | 423 | AT3g15350/K7L4_15 [Arabidopsis thaliana] |
RefSeq | NP_175718.2 | 0 | 1 | 411 | 1 | 423 | acetylglucosaminyltransferase [Arabidopsis thaliana] |
RefSeq | NP_566506.1 | 0 | 10 | 410 | 3 | 423 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002533550.1 | 0 | 13 | 410 | 6 | 416 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000000001 | 80 | 294 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000000001 | 80 | 294 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000000001 | 80 | 294 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000000001 | 80 | 294 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000000004 | 80 | 294 | 96 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |