Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00012576m |
Family | GT14 |
Protein Properties | Length: 268 Molecular Weight: 30458 Isoelectric Point: 8.2433 |
Chromosome | Chromosome/Scaffold: 089510 Start: 1723 End: 3982 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 2 | 249 | 0 |
MRRCLLALYHPRNRYVLHLDAEAPDADRAGLAAFVAAHPVLSAAGNVRVIEKANLVTYRGPTMVTTTLHAAAALLWGQGRGRGADWDWFINLSASDYPLV TQDDLMHVFSKLPRDLNFIDHTSNISWKAFARAMPVIIDPALYMKTKGDLFWVPEKRSLPTAFKLFTGSAWMVLSRPFVEYLIWGWDNLPRTVLMYYANF ISSPEGYFHTVACNAEAFRNTTVNSDLHFISWDNPPMQHPHYLTLADW |
Full Sequence |
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Protein Sequence Length: 268 Download |
MMRRCLLALY HPRNRYVLHL DAEAPDADRA GLAAFVAAHP VLSAAGNVRV IEKANLVTYR 60 GPTMVTTTLH AAAALLWGQG RGRGADWDWF INLSASDYPL VTQDDLMHVF SKLPRDLNFI 120 DHTSNISWKA FARAMPVIID PALYMKTKGD LFWVPEKRSL PTAFKLFTGS AWMVLSRPFV 180 EYLIWGWDNL PRTVLMYYAN FISSPEGYFH TVACNAEAFR NTTVNSDLHF ISWDNPPMQH 240 PHYLTLADWD RMLAAGAPFA RKFPRDDP |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 3.0e-59 | 1 | 253 | 257 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 8.0e-146 | 4 | 268 | 265 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH10050.1 | 0 | 2 | 268 | 86 | 352 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Triticum aestivum] |
GenBank | EEC75982.1 | 0 | 10 | 267 | 82 | 339 | hypothetical protein OsI_13099 [Oryza sativa Indica Group] |
RefSeq | NP_001050958.1 | 0 | 1 | 267 | 94 | 360 | Os03g0692000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147735.1 | 0 | 1 | 268 | 104 | 371 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Zea mays] |
RefSeq | XP_002466639.1 | 0 | 1 | 268 | 102 | 370 | hypothetical protein SORBIDRAFT_01g011480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000003 | 1 | 209 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000003 | 1 | 209 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000003 | 1 | 209 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000003 | 1 | 209 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000008 | 1 | 209 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE189170 | 257 | 12 | 268 | 0 |
EB640333 | 249 | 1 | 249 | 0 |
DR799268 | 248 | 21 | 268 | 0 |
EC876305 | 245 | 24 | 268 | 0 |
EE160166 | 239 | 30 | 268 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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