Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000313248 |
Family | GT14 |
Protein Properties | Length: 478 Molecular Weight: 52938.3 Isoelectric Point: 7.2543 |
Chromosome | Chromosome/Scaffold: 019096140 Start: 567 End: 7187 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 50 | 161 | 5.5e-32 |
FAYYIWGGRGDRARIFRLLLAVYHPRNRYLLHLSADESEEERRRLAAAIKAVPAIQAFGNVDVVGKPDRITYMGSTNIATTLRAAAILLKVDSGWDWFVT LSAMDYPLITQD |
Full Sequence |
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Protein Sequence Length: 478 Download |
MGAEKKWLLT LFSATFLSLL LLLLSSISAF SSPKPFPSIV QHGSHYPPAF AYYIWGGRGD 60 RARIFRLLLA VYHPRNRYLL HLSADESEEE RRRLAAAIKA VPAIQAFGNV DVVGKPDRIT 120 YMGSTNIATT LRAAAILLKV DSGWDWFVTL SAMDYPLITQ DGSPWVTLSR SFLEFCILGW 180 DNLPRTLLML SEALEFYELN KASGFEPEAP TYNALVGAYC WSMQMQDAFR VVDEMSKCVI 240 GPNARTYDII LHHLVKARRT EEAYSIFQQI SREPGYVIGD IDRKPHEISP QNRPIIQAHQ 300 IGPQKPAGHH VTMEDGGVLA QVSDPVHKNL VKRSKGSQHR LELEERTMKL QLKKRRHDRA 360 PLGSQRGGTV SELHPLIWVL LGGQATEVLG GVASNRISEK IEREEVQRRL AGVRKCGVVG 420 GEEGDGRRAG MEEGAEGEVE GQGHGGVARI REDFDGVGEG LGVEGGGRRA EGGGEREE 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam13041 | PPR_2 | 7.0e-9 | 211 | 256 | 46 | + PPR repeat family. This repeat has no known function. It is about 35 amino acids long and is found in up to 18 copies in some proteins. The family appears to be greatly expanded in plants and fungi. The repeat has been called PPR. | ||
PLN03183 | PLN03183 | 2.0e-9 | 162 | 189 | 28 | + acetylglucosaminyltransferase family protein; Provisional | ||
pfam02485 | Branch | 3.0e-18 | 50 | 189 | 189 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 2.0e-20 | 48 | 202 | 161 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002284096.1 | 0 | 29 | 161 | 34 | 166 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002284096.1 | 0.00000005 | 162 | 189 | 231 | 258 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311492.1 | 0 | 1 | 189 | 1 | 247 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315896.1 | 0 | 1 | 161 | 1 | 161 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315896.1 | 0.0000001 | 163 | 189 | 231 | 257 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000002 | 66 | 160 | 101 | 189 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000002 | 66 | 160 | 101 | 189 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000002 | 66 | 160 | 101 | 189 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000002 | 66 | 160 | 101 | 189 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000006 | 66 | 160 | 101 | 189 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |