Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00055573m |
Family | GT14 |
Protein Properties | Length: 426 Molecular Weight: 46774.5 Isoelectric Point: 9.1729 |
Chromosome | Chromosome/Scaffold: 077381 Start: 986 End: 3867 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 77 | 326 | 0 |
LAYLLIGARGDGRRLLRLLLAVYHPRNRYVLHLSADAPDDERQSLAAGVVAAAPAVGAFENVAVVGNPTAGTPVGSSGLAGTLRAAAVLLRLHPDWDWFL TLNAADYPLVTQDDLIHVLSSVPRDLNFIDHTSNIGSKEPEKVEQIIVDAGIYLSGRTNFFRGTQKRPAPVAFKFFTGSPWVILNRQFIEYCILAWENLP RILLMYFNNIIQPQEGYFHSVICNSLEFRNFTVNNDLRFIPREDPAQKEP |
Full Sequence |
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Protein Sequence Length: 426 Download |
MGTGTGGARG GAGGGGLVPG ERWWRVLFLA MASVSFLISL ILLFLSAPRL RLPGVAPSAS 60 TSTASAVRRG PNAPPCLAYL LIGARGDGRR LLRLLLAVYH PRNRYVLHLS ADAPDDERQS 120 LAAGVVAAAP AVGAFENVAV VGNPTAGTPV GSSGLAGTLR AAAVLLRLHP DWDWFLTLNA 180 ADYPLVTQDD LIHVLSSVPR DLNFIDHTSN IGSKEPEKVE QIIVDAGIYL SGRTNFFRGT 240 QKRPAPVAFK FFTGSPWVIL NRQFIEYCIL AWENLPRILL MYFNNIIQPQ EGYFHSVICN 300 SLEFRNFTVN NDLRFIPRED PAQKEPPFLS REHYGQMVDS GAPFARPFRE NDPLLDQIDG 360 NILKRWSHGP VPGAWCSGRK RWFSDPCSQW GDVNIVRPGP QVVKLHQYVN RTLEEAKSSS 420 NTCRQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 1.0e-43 | 97 | 338 | 246 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 4.0e-110 | 97 | 424 | 328 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU44151.1 | 0 | 48 | 425 | 20 | 406 | unknow protein [Oryza sativa Japonica Group] |
DDBJ | BAH92951.1 | 0 | 48 | 425 | 20 | 400 | Os05g0152400 [Oryza sativa Japonica Group] |
GenBank | EEC78537.1 | 0 | 48 | 425 | 50 | 430 | hypothetical protein OsI_18492 [Oryza sativa Indica Group] |
RefSeq | NP_001130356.1 | 0 | 4 | 425 | 2 | 421 | hypothetical protein LOC100191451 [Zea mays] |
RefSeq | XP_002439297.1 | 0 | 4 | 425 | 2 | 421 | hypothetical protein SORBIDRAFT_09g004030 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000003 | 91 | 279 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000003 | 91 | 279 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000003 | 91 | 279 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000003 | 91 | 279 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000000006 | 91 | 279 | 99 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |