Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10023687 |
Family | GT14 |
Protein Properties | Length: 430 Molecular Weight: 47632.5 Isoelectric Point: 9.9661 |
Chromosome | Chromosome/Scaffold: 505 Start: 579614 End: 581648 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 83 | 338 | 0 |
IAYLISGSKGDSKRILRLLFAIYHPKNHYLLHLDLSAPISERDALALAVDSSPVFRAAQNVDVIGKPNFAYHRGSSPVSATLHGASLLLKLSNNWDWFVS LGAADYPLVTQDDLLHIFSYLPKELNFVSHSSYIGWKESRRLKPIIVDPGLYLAEKSYMFHATQRRPLPTSFRLFTGSSFSVLSRNFIEHCIVGTDNLPR ILLMYFSNTMSSITSYFHTVLCNSPQFNRTVINQDLQYKVLDLSFRQEPRRLNSSD |
Full Sequence |
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Protein Sequence Length: 430 Download |
MPPSSPRPTT PTTPGGKDNS IRTTTFTVIL ATSFFSLLFI FSLSSSSSSA SSQSFRIRPD 60 PRLFPTRQPT FSKFPSDPAP PSIAYLISGS KGDSKRILRL LFAIYHPKNH YLLHLDLSAP 120 ISERDALALA VDSSPVFRAA QNVDVIGKPN FAYHRGSSPV SATLHGASLL LKLSNNWDWF 180 VSLGAADYPL VTQDDLLHIF SYLPKELNFV SHSSYIGWKE SRRLKPIIVD PGLYLAEKSY 240 MFHATQRRPL PTSFRLFTGS SFSVLSRNFI EHCIVGTDNL PRILLMYFSN TMSSITSYFH 300 TVLCNSPQFN RTVINQDLQY KVLDLSFRQE PRRLNSSDFT TMIRSGAAFA SQFGANDPVL 360 GMIDSDILRR SPGEILPGGW CLGDPANGTC SVWGDANVLR PGKGAARLEK FIVKMLSNGK 420 FRSQQCIVE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-62 | 83 | 320 | 238 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 3.0e-138 | 65 | 426 | 362 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80510.1 | 0 | 60 | 429 | 57 | 459 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_189046.1 | 0 | 57 | 429 | 47 | 417 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002282998.1 | 0 | 60 | 429 | 57 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299292.1 | 0 | 28 | 429 | 26 | 428 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518166.1 | 0 | 10 | 429 | 20 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000003 | 99 | 284 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000003 | 99 | 284 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000003 | 99 | 284 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000003 | 99 | 284 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000003 | 99 | 284 | 101 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY288592 | 308 | 56 | 363 | 0 |
DW503810 | 266 | 165 | 430 | 0 |
DT548015 | 326 | 93 | 416 | 0 |
DT507687 | 217 | 58 | 274 | 0 |
FC911943 | 292 | 56 | 347 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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