Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10034829 |
Family | GT14 |
Protein Properties | Length: 414 Molecular Weight: 46556.8 Isoelectric Point: 5.837 |
Chromosome | Chromosome/Scaffold: 66 Start: 808689 End: 810458 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 65 | 309 | 0 |
LAYWIFGTSGDGERMLRLVKAIYHPRNQYLLELDAESSYEQERVDLALRFESERVFSEFGNVNVVGKGWGVNQMGASGLAAMLHAAALLLRLNQHWDWFI NLSPDEYPLITPDDLLHAISSLPRDVNFIHYTNSTDWREKKMQIVVDPSLHLNNKGSYLYYAVEKRHTPDSFHIFGGSPRVILTRELLDYCVQGWDNLPR RLLMYLANTAYPLETYFHTILCNSPDFENTTILNSDLRYNIDHKN |
Full Sequence |
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Protein Sequence Length: 414 Download |
MKLPGFSSGL LLAVTMVVIL LTSRSIRIVW LPTRLSTTST DHITVHAGTN NIITPSKGPG 60 FPPVLAYWIF GTSGDGERML RLVKAIYHPR NQYLLELDAE SSYEQERVDL ALRFESERVF 120 SEFGNVNVVG KGWGVNQMGA SGLAAMLHAA ALLLRLNQHW DWFINLSPDE YPLITPDDLL 180 HAISSLPRDV NFIHYTNSTD WREKKMQIVV DPSLHLNNKG SYLYYAVEKR HTPDSFHIFG 240 GSPRVILTRE LLDYCVQGWD NLPRRLLMYL ANTAYPLETY FHTILCNSPD FENTTILNSD 300 LRYNIDHKNT DQERQLADML GSGAVFARAF NRDDDHLILD KIDEAALKRP RDAVVQGQWC 360 GLQDDDDDDD ASKVHNIDAV KAGLNGVELG ILLAKLVSQG TNTSYCHQML SNQ* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 4.0e-36 | 65 | 303 | 240 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 9.0e-82 | 54 | 397 | 352 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33324.1 | 0 | 41 | 408 | 37 | 415 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
GenBank | ABR16364.1 | 0 | 57 | 404 | 67 | 417 | unknown [Picea sitchensis] |
RefSeq | NP_001044392.1 | 0 | 54 | 397 | 56 | 402 | Os01g0772500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002310932.1 | 0 | 14 | 408 | 1 | 394 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515811.1 | 0 | 52 | 400 | 34 | 393 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000004 | 19 | 284 | 40 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000004 | 19 | 284 | 40 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000004 | 19 | 284 | 40 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000004 | 19 | 284 | 40 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000001 | 19 | 284 | 40 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG232568 | 174 | 241 | 414 | 0 |
ES809218 | 312 | 55 | 360 | 0 |
GR710096 | 257 | 55 | 309 | 0 |
CO084020 | 279 | 55 | 327 | 0 |
EY106666 | 280 | 56 | 330 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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