Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si001156m |
Family | GT14 |
Protein Properties | Length: 499 Molecular Weight: 54027.1 Isoelectric Point: 9.8998 |
Chromosome | Chromosome/Scaffold: 5 Start: 12550818 End: 12552902 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 136 | 388 | 0 |
LAYLISGSKGDLERLWRALHALYHPRNQYVVHLDRESPVSERLALAARVANSTVFRRAGNVHVIRRANMVTYRGPTMVANTLHACAVLLRRGGAWDWFIN LSASDYPLMTQDDILHVFSTVPRNTNFIEHTGYLGWKEGQRGRPLIVDPGLYGSRKQDIFWVSQKRELPSAFKLFTGSAWVALSRDFVEYTVWGWDNLPR TLLMYYTNFVSSPEGYFQTLLCNAPRFVRTVANHDLHHIQWDVPPRQHPHALA |
Full Sequence |
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Protein Sequence Length: 499 Download |
MQASARGEQH SPRSSAAKSP SPRGVGGGGG EHYSPSPSKT PRGVGASLKL LPSSAAWLLD 60 SRWALSAALS LLLFLAVALA LTSTSSSSPY ASASSFFSSS DSVEAHVIHA SQQPEAAAAA 120 NASPPPPPPG AGLPRLAYLI SGSKGDLERL WRALHALYHP RNQYVVHLDR ESPVSERLAL 180 AARVANSTVF RRAGNVHVIR RANMVTYRGP TMVANTLHAC AVLLRRGGAW DWFINLSASD 240 YPLMTQDDIL HVFSTVPRNT NFIEHTGYLG WKEGQRGRPL IVDPGLYGSR KQDIFWVSQK 300 RELPSAFKLF TGSAWVALSR DFVEYTVWGW DNLPRTLLMY YTNFVSSPEG YFQTLLCNAP 360 RFVRTVANHD LHHIQWDVPP RQHPHALALA DMPAMVSSGA PFARKFPRDD PVLDAIDADL 420 LGRPPRAGPT SAGGGNGTVA AAATTTQRFV PGGWCGGDAS CGGVDNDWVL RPGPGAERFQ 480 RLMDRIVRSE AFHNRQCK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 3.0e-79 | 138 | 396 | 263 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 138 | 498 | 361 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF87198.1 | 0 | 130 | 498 | 111 | 463 | unknown [Zea mays] |
DDBJ | BAH01648.1 | 0 | 32 | 498 | 19 | 480 | unnamed protein product [Oryza sativa Japonica Group] |
RefSeq | NP_001148073.1 | 0 | 7 | 492 | 8 | 457 | xylosyltransferase oxt [Zea mays] |
RefSeq | XP_002457166.1 | 0 | 6 | 498 | 7 | 490 | hypothetical protein SORBIDRAFT_03g002590 [Sorghum bicolor] |
RefSeq | XP_002457167.1 | 0 | 6 | 498 | 7 | 496 | hypothetical protein SORBIDRAFT_03g002600 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000000002 | 147 | 352 | 96 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000000002 | 147 | 352 | 96 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000000002 | 147 | 352 | 96 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000000002 | 147 | 352 | 96 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000000005 | 147 | 352 | 96 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CA157959 | 285 | 145 | 428 | 0 |
DR097254 | 277 | 138 | 414 | 0 |
EB451733 | 286 | 138 | 423 | 0 |
DY275686 | 288 | 138 | 425 | 0 |
GH721256 | 227 | 194 | 420 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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