Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb01g011480.1 |
Family | GT14 |
Protein Properties | Length: 458 Molecular Weight: 49849.1 Isoelectric Point: 7.0932 |
Chromosome | Chromosome/Scaffold: 1 Start: 10311267 End: 10321403 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 89 | 351 | 0 |
FAYVISGSAGDAGMMRRCLLALYHPRNRYVLHLDAQAPDADRADLAAFVAAHPVLAAAGNVKVVEKANLVTYRGPTMVTTTLHAAALLLWGDGRGRGGAD WDWFINLSASDYPLVTQDDLMHVFSKLPRDLNFIDHTSNISWKAFARAMPVIVDPALYMKTKGDLVWMPERRSLPTAFKLFTGSAWMVLSRPFVEYLIWG WDNLPRTLLMYYANFISSPEGYFHTVACNADKFRNTTVNSDLHFISWDNPPMQHPHYLTVADW |
Full Sequence |
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Protein Sequence Length: 458 Download |
MEAAAPCPRA HPVDLRWLLS VAAGGLFALL LLLATSPSFQ LPSSSAATSR LFLTPASRSS 60 SARPALPPLF VEPALSRPPP PPAASLPRFA YVISGSAGDA GMMRRCLLAL YHPRNRYVLH 120 LDAQAPDADR ADLAAFVAAH PVLAAAGNVK VVEKANLVTY RGPTMVTTTL HAAALLLWGD 180 GRGRGGADWD WFINLSASDY PLVTQDDLMH VFSKLPRDLN FIDHTSNISW KAFARAMPVI 240 VDPALYMKTK GDLVWMPERR SLPTAFKLFT GSAWMVLSRP FVEYLIWGWD NLPRTLLMYY 300 ANFISSPEGY FHTVACNADK FRNTTVNSDL HFISWDNPPM QHPHYLTVAD WDRMVASDAP 360 FARKFLRDDP VLDRIDAEIL GGRGPGMVAP GGWCQAAAAA GAGGENSNGT DDDPCAAVGN 420 AAFLRPGPGA ERLQRLVTSL LSEENFRPRQ CVVEDEK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 6.0e-55 | 89 | 355 | 271 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 7.0e-151 | 89 | 452 | 364 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAV49991.1 | 0 | 67 | 451 | 48 | 424 | putative N-acetylglucosaminyltransferase [Hordeum vulgare subsp. vulgare] |
EMBL | CAH05144.1 | 0 | 69 | 451 | 50 | 424 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Aegilops tauschii] |
EMBL | CAH10066.1 | 0 | 69 | 451 | 50 | 424 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Triticum turgidum] |
RefSeq | NP_001147735.1 | 0 | 1 | 457 | 1 | 455 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Zea mays] |
RefSeq | XP_002466639.1 | 0 | 1 | 457 | 1 | 457 | hypothetical protein SORBIDRAFT_01g011480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000002 | 102 | 311 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000002 | 102 | 311 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000002 | 102 | 311 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000002 | 102 | 311 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000005 | 102 | 311 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |