Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10033379 |
Family | GT14 |
Protein Properties | Length: 412 Molecular Weight: 46514.7 Isoelectric Point: 5.8945 |
Chromosome | Chromosome/Scaffold: 488 Start: 1016974 End: 1019090 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 65 | 305 | 0 |
LAYWIFGTSGDGERMLRLLKAIYHPRNQYLLELDAESSYDQERVDLALRVESERVFSEFGNVNVIGKGWGVNQMGASGLAAMLNAAALLLRLNQHWDWFI NLSPEEYPLITPDDLLHAISSLPRDVNFIHYTNSNDWREKKMQIVVDPSLHLNNKDSYLYYAVEKRNIPDAFRIFGGSPRVILNRELLDYCVQGWDNLPR RLLMYLANTAYPLETYFHTVLCNSPDFQNTTILNSDLRYNI |
Full Sequence |
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Protein Sequence Length: 412 Download |
MKLPGFSSGL LLAVTMDVIL LTSRSIRIVW LPYRLSTTST DHITVQAGTN NIITPSKGPG 60 FPPVLAYWIF GTSGDGERML RLLKAIYHPR NQYLLELDAE SSYDQERVDL ALRVESERVF 120 SEFGNVNVIG KGWGVNQMGA SGLAAMLNAA ALLLRLNQHW DWFINLSPEE YPLITPDDLL 180 HAISSLPRDV NFIHYTNSND WREKKMQIVV DPSLHLNNKD SYLYYAVEKR NIPDAFRIFG 240 GSPRVILNRE LLDYCVQGWD NLPRRLLMYL ANTAYPLETY FHTVLCNSPD FQNTTILNSD 300 LRYNIDHKNT DHELQLADML GSGAVFARAF NRDDDDHLIL DKVDEAALKR PRDEVVHGQW 360 RRLQDDDDGS TVHNINAVKA GLNGVELGIL LAKLASQGTN TSYCHQMLSN Q* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-39 | 65 | 303 | 240 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-81 | 11 | 395 | 397 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33324.1 | 0 | 41 | 406 | 37 | 415 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
GenBank | ABR16364.1 | 0 | 57 | 381 | 67 | 396 | unknown [Picea sitchensis] |
RefSeq | XP_002310932.1 | 0 | 41 | 406 | 16 | 394 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515811.1 | 0 | 52 | 398 | 34 | 393 | acetylglucosaminyltransferase, putative [Ricinus communis] |
RefSeq | XP_002531062.1 | 0 | 58 | 381 | 43 | 371 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000006 | 19 | 284 | 40 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000006 | 19 | 284 | 40 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000006 | 19 | 284 | 40 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000006 | 19 | 284 | 40 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000002 | 19 | 284 | 40 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES809218 | 339 | 55 | 382 | 0 |
JG232568 | 180 | 236 | 412 | 0 |
GR710096 | 262 | 55 | 314 | 0 |
CO084020 | 279 | 55 | 327 | 0 |
EY106666 | 279 | 57 | 330 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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