Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_75.39 |
Family | GT14 |
Protein Properties | Length: 391 Molecular Weight: 44528.6 Isoelectric Point: 7.4496 |
Chromosome | Chromosome/Scaffold: 75 Start: 404354 End: 407280 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 43 | 298 | 0 |
LAYLISGSNGDGESLKRTLKALYHPRNQYVVHLDLEASPEERLELARFVRDEPLFAEVGNVRMIVRANLVTYRGPTMVSNTLHAAAILLRGGEERDWFIN LSASDYPLVTQDDLLHALSAVPRHLNFIEHTSDIGWKEWHRAKPVIIDPGLYSLEKSDVFWVTEKRSVPTAYRLFTGSAWMMLSRPFIEYCVWGWDNLPR VVLMYYANFLSSPEGYFHTVICNVDEFRNATVNHDLHFISWDNPPKQHPHFLTVED |
Full Sequence |
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Protein Sequence Length: 391 Download |
MDTTKLQQNQ KKRRCTKAVK TRPSFVESKL QISPTSTDPV PRLAYLISGS NGDGESLKRT 60 LKALYHPRNQ YVVHLDLEAS PEERLELARF VRDEPLFAEV GNVRMIVRAN LVTYRGPTMV 120 SNTLHAAAIL LRGGEERDWF INLSASDYPL VTQDDLLHAL SAVPRHLNFI EHTSDIGWKE 180 WHRAKPVIID PGLYSLEKSD VFWVTEKRSV PTAYRLFTGS AWMMLSRPFI EYCVWGWDNL 240 PRVVLMYYAN FLSSPEGYFH TVICNVDEFR NATVNHDLHF ISWDNPPKQH PHFLTVEDYQ 300 RMVDSNAPFA RKFGHNEPVL DKIDSELLRR NGTGFVPGGW FDKEDNSSVS NSTYLKINTT 360 ELRPGPGAER LQSLITGLLS AEKLHGSQCV * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 2.0e-81 | 43 | 303 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 20 | 390 | 374 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28190.1 | 0 | 23 | 390 | 127 | 472 | unnamed protein product [Vitis vinifera] |
GenBank | EAZ01579.1 | 0 | 18 | 390 | 63 | 444 | hypothetical protein OsI_23613 [Oryza sativa Indica Group] |
RefSeq | XP_002282083.1 | 0 | 25 | 389 | 63 | 427 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285159.1 | 0 | 23 | 390 | 61 | 429 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313551.1 | 0 | 23 | 389 | 58 | 428 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0000002 | 13 | 268 | 61 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0000002 | 13 | 268 | 61 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0000002 | 13 | 268 | 61 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0000002 | 13 | 268 | 61 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000006 | 13 | 268 | 61 | 294 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR953914 | 290 | 36 | 325 | 0 |
EB451733 | 290 | 41 | 330 | 0 |
EX267189 | 239 | 153 | 391 | 0 |
DV160634 | 288 | 23 | 307 | 0 |
GR996421 | 267 | 23 | 288 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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