Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10014767m |
Family | GH3 |
Protein Properties | Length: 564 Molecular Weight: 61150.9 Isoelectric Point: 5.7517 |
Chromosome | Chromosome/Scaffold: 2 Start: 691427 End: 698055 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 11 | 244 | 0 |
ASRLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGATRDPELVKRIGAATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQEMTDVILGLQG DPPSNLRKGVPYVGGKDKVAACAKHFVGDGGTTNGINENNTVIDMHGLLSIHMPAYSDSIIKGVSTIMVSYSSWNGEKMHANRELVTGFLKGTLKFKGFV ISDWQGIDRITSPPHSNYTYSVQAGIQAGIDMVM |
Full Sequence |
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Protein Sequence Length: 564 Download |
MINDFQRGSL ASRLGIPMIY GIDAVHGHNN VYNATIFPHN VGLGATRDPE LVKRIGAATA 60 LEVRATGIPY VFAPCIAVCR DPRWGRCYES YSEDHKIVQE MTDVILGLQG DPPSNLRKGV 120 PYVGGKDKVA ACAKHFVGDG GTTNGINENN TVIDMHGLLS IHMPAYSDSI IKGVSTIMVS 180 YSSWNGEKMH ANRELVTGFL KGTLKFKGFV ISDWQGIDRI TSPPHSNYTY SVQAGIQAGI 240 DMVMIPFNLT EFIDDLTDLV KNNVITMDRI DDAVGRILLV KFSMGLFENP LADLSLVNEL 300 GSQAHRDLAR EAVRKSLVLL KNGKNESHPL IPLPKKAPKI LVAGSHADNL GYQCGGWTIN 360 WQGFSGNNYT RGTTILGAIR SAVDSSTEVV YRDNPDSDFV KSNNFDYAIV AVGEAPYAES 420 AGDSMTLTML DPDPSVITNV CEAVKCVVII ISGRPIVIEP YISSVDALVA AWLPGTEGQG 480 VTDVLFGDYG FSGKLPRSWF KTVDQLPMNV GDPHYDPLFP FDFGLKTESV PSIVARSTSA 540 GVDGKPFVFL VMISLIFALY FTG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-26 | 13 | 509 | 550 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-45 | 317 | 525 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 6.0e-70 | 12 | 525 | 583 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-72 | 11 | 360 | 357 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-75 | 2 | 278 | 281 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC42711.1 | 0 | 1 | 560 | 1 | 560 | unknown protein [Arabidopsis thaliana] |
EMBL | CBI24995.1 | 0 | 1 | 561 | 51 | 614 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_680141.2 | 0 | 1 | 561 | 98 | 658 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002262992.1 | 0 | 1 | 561 | 96 | 653 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514453.1 | 0 | 1 | 553 | 94 | 646 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 1 | 529 | 73 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 1 | 529 | 73 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iew_A | 0 | 1 | 529 | 73 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iev_A | 0 | 1 | 529 | 73 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1ieq_A | 0 | 1 | 529 | 73 | 601 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 405 | 1 | 405 | 0 |
CX071482 | 252 | 287 | 538 | 0 |
CO083326 | 297 | 172 | 468 | 0 |
CF652906 | 309 | 71 | 379 | 0 |
FN998758 | 303 | 1 | 303 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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