Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10034848 |
Family | GH3 |
Protein Properties | Length: 608 Molecular Weight: 65587 Isoelectric Point: 6.1989 |
Chromosome | Chromosome/Scaffold: 66 Start: 1042956 End: 1046805 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 107 | 247 | 0 |
SSRLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGATRQVDPDLVKRIGAATALEARATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKVVEAMTEIIPGL QGDMPAHSRRGVPYAIGKDKVAACAKHFVGDGGTTKGLNEN |
Full Sequence |
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Protein Sequence Length: 608 Download |
MCRGSRLQLF GILWLCAWVV GTEAETAKYK DPKQPPTIRI KDLMSRMSLA EKIGQMTQLD 60 RESATPEIMR TYSIGSVLSG GGSAPLPDAT AKDWIDMVNT FQKGSMSSRL GIPMIYGIDA 120 VHGHNNVYNA TIFPHNVGLG ATRQVDPDLV KRIGAATALE ARATGIPYVF APCIAVCRDP 180 RWGRCYESYS EDPKVVEAMT EIIPGLQGDM PAHSRRGVPY AIGKDKVAAC AKHFVGDGGT 240 TKGLNENNTG FVISDWQGID RITPTAHENY TYSVQEGVLA GIDMVMLPYN HTEFIDDLTL 300 LVKNNVIPMD RIDDAVRRIL LVKFNLGLFE NPMADLSFVN ELGSQAHRAL AREAVRKSAV 360 LLKNGKNGTG PLLPLPKKAS RILVAGTHAD NLGYQCGGWT INWQGFSGNN DTSGTTILTA 420 IRSTVDPKTE VVFQEDPNIQ FLEGNKFDYA IVVVGEPPYA ETAGDSSDLT MKDPGPNTIN 480 NVCGAVKCAV VVVSGRPIVI EPYIGSMDAL VAAWLPGSEG QGVADVLFGD FGFTGRLART 540 WFKSVAQLPM NLGDAHYDPL FPFDFGIKTA SFNGSIERST SDGGATRPCV AVLLISAILT 600 SLISSYK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 3.0e-12 | 250 | 559 | 350 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-42 | 359 | 567 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 4.0e-54 | 48 | 320 | 319 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 4.0e-57 | 47 | 402 | 403 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 3.0e-57 | 40 | 575 | 658 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39076.1 | 0 | 28 | 569 | 27 | 630 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266589.1 | 0 | 11 | 569 | 10 | 622 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002266675.1 | 0 | 11 | 569 | 10 | 622 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002278363.1 | 0 | 7 | 569 | 6 | 622 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002514453.1 | 0 | 5 | 595 | 2 | 646 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 29 | 569 | 5 | 599 | A Chain A, Crystal Structure Of Tt0538 Protein From Thermus Thermophilus Hb8 |
PDB | 1x38_A | 0 | 29 | 569 | 5 | 599 | A Chain A, Crystal Structure Of Tt0538 Protein From Thermus Thermophilus Hb8 |
PDB | 1lq2_A | 0 | 29 | 569 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 29 | 569 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 29 | 569 | 5 | 599 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |