Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna07689.1-v1.0-hybrid |
Family | GH3 |
Protein Properties | Length: 624 Molecular Weight: 67479 Isoelectric Point: 9.2998 |
Chromosome | Chromosome/Scaffold: Start: 8812462 End: 8815619 |
Description | Glycosyl hydrolase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 106 | 335 | 0 |
STRLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGATRQRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQGDMPPS FQKGAPYVGGKGKVAACAKHYVGDGGTTRGINENNTVIDWNGLLGIHMPAYLNSILKGVATVMVSYSSWNGKKMHANQDLVTGYLKNKLRFRGFVISDWE GIDRITSPPKANYSYSVQAGVSAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 624 Download |
MAKLSIPILG LLLLCCLSAL AEAKYSKYKD PKQPLNVRIR DLMKRMTLAE KIGQMVQIER 60 EVATPDVMTK YLIGSVLSGG GSVPAPKASA ATWVNLVNGI QKGSLSTRLG IPMIYGIDAV 120 HGHNNVYNAT IFPHNVGLGA TRQRIGEATA LEVRATGIPY AFAPCIAVCR DPRWGRCYES 180 YSEDHKIVQA MTEIIPGLQG DMPPSFQKGA PYVGGKGKVA ACAKHYVGDG GTTRGINENN 240 TVIDWNGLLG IHMPAYLNSI LKGVATVMVS YSSWNGKKMH ANQDLVTGYL KNKLRFRGFV 300 ISDWEGIDRI TSPPKANYSY SVQAGVSAGI DMIMVPYNFT EFIDDLTYQV KNNIIPMSRI 360 DDAVKRILRV KFVMGLFENP LADLSLADQL GNKEHRELAR EAVRKSLVLL KNGKSATKPL 420 LPLSKKAGKI LIAGSHADNL GFQCGGWTIT WQGLGGNDLT VGTTILNAVK TTVDPTTQVV 480 YNESPDANFV KSNKFSHAVV VVGEPPYAET FGDSMNLTIS EAGLSTINNV CGAVKCVVVI 540 ISGRPVVVQP YLSKIDALVA AWLPGTEGQG VADVLFGDYG FTGKLARTWF KSVDQLPMNV 600 GDAHYDPLFP FGFGLTTKPT KNY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-33 | 108 | 616 | 590 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-40 | 407 | 616 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-65 | 31 | 616 | 668 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 4.0e-81 | 46 | 470 | 440 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-83 | 47 | 370 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 25 | 623 | 2 | 605 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
PDB | 1iex_A | 0 | 25 | 623 | 2 | 605 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
PDB | 1iew_A | 0 | 25 | 623 | 2 | 605 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
PDB | 1iev_A | 0 | 25 | 623 | 2 | 605 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
PDB | 1ieq_A | 0 | 25 | 623 | 2 | 605 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |