Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna03614.1-v1.0-hybrid |
Family | GH3 |
Protein Properties | Length: 1025 Molecular Weight: 114691 Isoelectric Point: 8.2241 |
Chromosome | Chromosome/Scaffold: 4 Start: 24545253 End: 24551362 |
Description | Glycosyl hydrolase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 507 | 736 | 0 |
STRLAIPLIYGIDAIHGHNNVYKATIFPHNVGLGATRQRIGAATALEIRATGIHYTFAPCVAVCRDPRWGRCYESYSEDPRLVQAMTEIIPGLQGEIPAN SRKGVPYVSGNDKVAACAKHYVGDGGTAMGINENNAVIDRHGLLSIHMPPYPSAIIKGVASVMISYSSWNGVKMHANRELITGFLKGTLGFKGFVISDWQ GIDMITSPSHSNYSYSIMKGISAGIDMIMV |
Full Sequence |
---|
Protein Sequence Length: 1025 Download |
MEKGEAEEKK RPIFRDIRRY YCEYCGNCRS KKSLIASHIL AQHKDEMERD EGDEEVEVEK 60 CNTCEECGAS FNKPAYLKQH MISHSLEHWI PPKNSKMREG TDLNGPVPGG RPPVKLHQVT 120 LNHTRPYVCT IDDCRSAYRR KDHLNRHLLQ HQGKLFKCPI ENCKSEFAFQ GNVKRHVVEL 180 HSENCPSISV EGQKQHVCQE PGCGKVFQFA SKLWKYEDSH VKLDSVEAFC SEPDCMKYFS 240 NKQCLQDHIQ SCHTHITCEI CGNKEWKKNI RTHLHAHEEG VSSLEIKCEY EGCLHTFTKK 300 LNLLQHVKAV HLQQKPFSCS FSGCSKTFSY KHVRDKHEKS GCHGDFEEAD EQFRSRPRGG 360 RKRMCPTVEM LVRKRVTPPD QFGPETEFLS QFFSQEEMAE ILISLMGLLL LCICIEIMTM 420 TAEAECMKYK DPNQPLNTRI NDLLSRMTLE EKIGQMTQID RSVASPEVMY KYKIGSVLSG 480 GGSVPAKNAS AETWIRMVND FQNGSLSTRL AIPLIYGIDA IHGHNNVYKA TIFPHNVGLG 540 ATRQRIGAAT ALEIRATGIH YTFAPCVAVC RDPRWGRCYE SYSEDPRLVQ AMTEIIPGLQ 600 GEIPANSRKG VPYVSGNDKV AACAKHYVGD GGTAMGINEN NAVIDRHGLL SIHMPPYPSA 660 IIKGVASVMI SYSSWNGVKM HANRELITGF LKGTLGFKGF VISDWQGIDM ITSPSHSNYS 720 YSIMKGISAG IDMIMVPYNY TEFIEGLTFR VKNKIIPMSR IDDAVKRILR VKFTMGQFEK 780 PLADLRLVSQ LGSQEHRELA REAVRRSLVL LKNGECAEKP ILPLPKKTSK ILVAGTHADD 840 LGYQCGGWTI EWQGHSGNNL TQGTTVLSAI RNTVAPETRV VYKKNPDAKF MKSNNFSHAI 900 VIVGEPPYAE GAGDNLNLTI PKSGRRVIRN VCGASKCVVC LITGRPVVIE PYLSIIDALV 960 AAWLPGTEGQ GVADVLFGDY GFTGKLPRTW FKSVHQLPMN VGDPDYDPLF AYGYGLTTQP 1020 TNAN* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 5.0e-33 | 435 | 1017 | 680 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-55 | 808 | 1017 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 8.0e-81 | 448 | 771 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 7.0e-82 | 447 | 879 | 447 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 5.0e-83 | 440 | 1017 | 653 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 429 | 1021 | 5 | 602 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1x38_A | 0 | 429 | 1021 | 5 | 602 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1lq2_A | 0 | 429 | 1021 | 5 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 429 | 1021 | 5 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 429 | 1021 | 5 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Sequence Alignments (This image is cropped. Click for full image.) |
---|