Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10010656 |
Family | GH3 |
Protein Properties | Length: 613 Molecular Weight: 66547.5 Isoelectric Point: 6.9182 |
Chromosome | Chromosome/Scaffold: 274 Start: 60043 End: 62567 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 90 | 324 | 0 |
STRLGIPMIYGIDAVHGHNNVYNATIFPHNIGLGATREPELAKRIGAATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPEIVKAMTELVNGLQG DLPANSHKGVPYVAGKKKVAACAKHFVGDGGTVDGINENNTIIDWHGLMKIHMPGYYTSIIKGVSSVMVSYSSWNGIKMHANKKMVTDFLKGTLRFRGFV ISDWEGIDRITSPPHANYTYSVEKAITAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 613 Download |
MSSSNSTNLM VQLLGIAAAM LLLLAATADA AHYKDPKQPV GARIKDLIGR VMKNYFIGSL 60 LSGGGSVPAE KASPQQWIKM INDFQNGSLS TRLGIPMIYG IDAVHGHNNV YNATIFPHNI 120 GLGATREPEL AKRIGAATAL EVRATGIPYA FAPCIAVCRD PRWGRCYESY SEDPEIVKAM 180 TELVNGLQGD LPANSHKGVP YVAGKKKVAA CAKHFVGDGG TVDGINENNT IIDWHGLMKI 240 HMPGYYTSII KGVSSVMVSY SSWNGIKMHA NKKMVTDFLK GTLRFRGFVI SDWEGIDRIT 300 SPPHANYTYS VEKAITAGID MVMVPLNYTE FIDDLTMLVN KGFIPMSRID DAVKRILRVK 360 FVMGLFEDPM ADESLIHELG SKEHRELARE AVRKSLVLLK NGKDANQPLL PLPKEAPKIL 420 VAGTHADNLG FQCGGWAIEW QGFSGNDRTS GTTILSAIKS TVDPNTEVVY QENPAEDYVK 480 SNNFSYAIVV VGEHPYAETM GDSLNLTIPS PGPSTIQNVC SVVKCVVVVI SGRPVVIEPY 540 VSSMDAIVAA WLPGTEGQGV ADVLFGDYGF TGKLPRTWFK SVDQLPMNVG DKHYDPLYPF 600 GFGLTTEPVK ST* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 8.0e-13 | 545 | 605 | 83 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 8.0e-42 | 396 | 605 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-54 | 36 | 470 | 470 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 2.0e-79 | 50 | 359 | 314 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 7.0e-82 | 91 | 438 | 355 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 20 | 611 | 11 | 625 | unknown [Populus trichocarpa] |
EMBL | CBI39076.1 | 0 | 33 | 611 | 28 | 635 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266470.1 | 0 | 33 | 611 | 28 | 627 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 33 | 611 | 3 | 602 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 20 | 611 | 3 | 612 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 29 | 610 | 1 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1iex_A | 0 | 29 | 610 | 1 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1iew_A | 0 | 29 | 610 | 1 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1iev_A | 0 | 29 | 610 | 1 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ieq_A | 0 | 29 | 610 | 1 | 603 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |