Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10012965m |
Family | GH3 |
Protein Properties | Length: 629 Molecular Weight: 68377.2 Isoelectric Point: 9.5389 |
Chromosome | Chromosome/Scaffold: 2 Start: 7263137 End: 7267229 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 106 | 340 | 0 |
LSTRLGIPMIYGIDAVHGHNNVYGATIFPHNVGLGVTRDPKLLKRIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDYRIVQQMTEIIPGLQ GDLPTKRRGVPFVGGKTKVAACAKHFVGDGGTVRGIDENNTVIDSKGLYGIHMPGYYNAVNKGVATVMVSYSAWNGLRMHANKELVTGFLKNKLKFRGFV ISDWQGIDRITTPPHLNYSYSVYAGINAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 629 Download |
MVIPSKALCL LVLCFTMAAT AAGGGSFKYK DPKQPMGARI RDLMNRMTLQ EKIGQMVQIE 60 RSVATPEVMK KYFIGSVLSG GGSVPAPKAT PENWVNMVNE IQKAALSTRL GIPMIYGIDA 120 VHGHNNVYGA TIFPHNVGLG VTRDPKLLKR IGEATALEVR ATGIPYAFAP CIAVCRDPRW 180 GRCYESYSED YRIVQQMTEI IPGLQGDLPT KRRGVPFVGG KTKVAACAKH FVGDGGTVRG 240 IDENNTVIDS KGLYGIHMPG YYNAVNKGVA TVMVSYSAWN GLRMHANKEL VTGFLKNKLK 300 FRGFVISDWQ GIDRITTPPH LNYSYSVYAG INAGIDMIMV PYNYTEFIDE INSQIQKKLI 360 PMSRIDDAVK RILRVKFTMG LFEEPLADLS FANHLGSKEH RELAREAVRK SLVLLKNGKK 420 GDKPLLPLPK KTGKILVAGG HADNLGYQCG GWTITWQGLN GNDLTVGTTI LAAVKNTVAP 480 TTQVVYNENP DANFVKSGKF DYAIVVVGEP PYAEMFGDST NLTISEPGPS TIGNVCGSVK 540 CVVVVVSGRP VVMQPYVSTI DALVAAWLPG TEGQGVADAL FGDYGFTGKL ARTWFKSVKQ 600 LPMNVGDLHY DPLYPFGFGL TTKPYKSS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 2.0e-10 | 561 | 621 | 83 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-29 | 437 | 621 | 204 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 7.0e-54 | 6 | 413 | 431 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 5.0e-74 | 47 | 475 | 443 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-91 | 48 | 375 | 332 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 28 | 624 | 27 | 624 | beta-D-glucosidase [Gossypium hirsutum] |
EMBL | CAA07070.1 | 0 | 1 | 624 | 4 | 625 | beta-D-glucosidase [Tropaeolum majus] |
RefSeq | NP_197595.2 | 0 | 5 | 626 | 5 | 623 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002313632.1 | 0 | 10 | 627 | 12 | 627 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523935.1 | 0 | 27 | 627 | 30 | 632 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 29 | 626 | 5 | 603 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1iex_A | 0 | 29 | 626 | 5 | 603 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1iew_A | 0 | 29 | 626 | 5 | 603 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1iev_A | 0 | 29 | 626 | 5 | 603 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1ieq_A | 0 | 29 | 626 | 5 | 603 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |