Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10043457 |
Family | GH3 |
Protein Properties | Length: 660 Molecular Weight: 72436.8 Isoelectric Point: 7.0168 |
Chromosome | Chromosome/Scaffold: 25 Start: 2932556 End: 2934878 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 140 | 371 | 0 |
KTRLAIPMIYGIDAVHGHNNVVNATIFPHNINLGVTRDPGLVKKIGGATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDHKIVEEMTDFVNGLQG DLPPNYPRDYPYIQGKDKVAGCAKHYIGDGGTVKGINENNTIIDVKGLMSMFMPAYDLAIQKGIASVMISFSSINGVRMHANADLISHLKKKFKGFVISD WQAIDKITDPPGSNYTYSVQASILAGLDMIMV |
Full Sequence |
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Protein Sequence Length: 660 Download |
MHTYPFFLGS CQNSSRLNVE ICRTLETVKA LAVGISVVFL LCWLTCEAGR KVTKAVDVNV 60 KYKDPNVPVE DRITDLLSRM TLQEKIGQMT QIEVPVATAE IMDKYFIGSL LTGGGTQPDE 120 NASPKYWVDM MNMFQKGSMK TRLAIPMIYG IDAVHGHNNV VNATIFPHNI NLGVTRDPGL 180 VKKIGGATAL EVRATGIPYA FAPCIAVCRD PRWGRCYESY SEDHKIVEEM TDFVNGLQGD 240 LPPNYPRDYP YIQGKDKVAG CAKHYIGDGG TVKGINENNT IIDVKGLMSM FMPAYDLAIQ 300 KGIASVMISF SSINGVRMHA NADLISHLKK KFKGFVISDW QAIDKITDPP GSNYTYSVQA 360 SILAGLDMIM VPDDYTSFIG NLTQLVNDKV IPMSRIDDAV TRILRVKFLV GLFENPFPDY 420 TMADMLGKQE HRELAREAVR KSLVLLKNGK TEDKPMLPLP KKAKKILVVG SHADNLGYQC 480 GGWTVEWQGY SGKDRTAGTT ILAGIKKTVD PTTEVMFDES ADPAFLKANK DADFAIVVVG 540 EKPYAETKGD NLNLTIPQPG QEVIKKACSS GVKCVVILIS GRPLVIEQFL PVMDALVAAF 600 LPGSEGQGVA DLLFGDYGFT GKLARTWMKR VDQLPMNFGD KDYDPLFPFG FGLETNKGG* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 7.0e-39 | 64 | 657 | 662 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-44 | 443 | 653 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 9.0e-70 | 80 | 515 | 450 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 7.0e-77 | 65 | 653 | 677 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 5.0e-83 | 81 | 406 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL58976.1 | 0 | 60 | 656 | 77 | 673 | AC091811_25 putative exohydrolase [Oryza sativa Japonica Group] |
GenBank | AAR14129.1 | 0 | 37 | 655 | 10 | 620 | exo-beta-glucanase [Lilium longiflorum] |
GenBank | ABK95015.1 | 0 | 62 | 655 | 26 | 620 | unknown [Populus trichocarpa] |
EMBL | CAA07070.1 | 0 | 60 | 655 | 27 | 623 | beta-D-glucosidase [Tropaeolum majus] |
RefSeq | XP_002311926.1 | 0 | 29 | 655 | 3 | 630 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 60 | 656 | 3 | 600 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1iex_A | 0 | 60 | 656 | 3 | 600 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1iew_A | 0 | 60 | 656 | 3 | 600 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1iev_A | 0 | 60 | 656 | 3 | 600 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ieq_A | 0 | 60 | 656 | 3 | 600 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 426 | 108 | 530 | 0 |
FN998758 | 328 | 105 | 429 | 0 |
FN998446 | 324 | 105 | 425 | 0 |
FN998735 | 316 | 105 | 417 | 0 |
HO784016 | 50 | 60 | 109 | 0.0000000002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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