Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G114800.6 |
Family | GH3 |
Protein Properties | Length: 488 Molecular Weight: 53353 Isoelectric Point: 6.7315 |
Chromosome | Chromosome/Scaffold: 13 Start: 28433119 End: 28436604 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 2 | 199 | 0 |
DPKLVKKIGAATALESRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPHLVDAMTEIVPGLQGDMPAKSSKGVPFVAGNKNVAACAKHYVGDGGTTKGIN ENNTVINWHDLLSIHMPGYYTSIIKGVSTVMVSYSSWNGVKMHANRDLVTGFLKNKLRFRGFVISDWEGIDRITYPPHANYTYSIQAAIGSGIDMVMV |
Full Sequence |
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Protein Sequence Length: 488 Download |
MDPKLVKKIG AATALESRAT GIPYVFAPCI AVCRDPRWGR CYESYSEDPH LVDAMTEIVP 60 GLQGDMPAKS SKGVPFVAGN KNVAACAKHY VGDGGTTKGI NENNTVINWH DLLSIHMPGY 120 YTSIIKGVST VMVSYSSWNG VKMHANRDLV TGFLKNKLRF RGFVISDWEG IDRITYPPHA 180 NYTYSIQAAI GSGIDMVMVP YDYSSFIDGL TFLVKNNFIP MSRIDDAVKR ILRVKFAVGL 240 FENPLADNSL VDQLGRQEHR ELAREAVRRS LVLLKNGHYA DQPLLPLPKK TSKILVAGSH 300 ADNLGYQCGG WTIEWQGFSG NDLTNGTTVL TAIKNTVDSS TNVVYEENPD PKFVKSNNFS 360 CAIVVVGEHP YVETKGDSMN LTIPEPGPTT IRNVCGALKC VVILMSGRPV VIEPDIDSMD 420 ALVAAWLPGS EGQGVADVLF GDYGFSGKLP RTWFKTVDQL PMNVGDPHYD PLFPFGFGLT 480 TEPTKAY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-38 | 9 | 463 | 506 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-53 | 271 | 480 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 8.0e-69 | 2 | 234 | 235 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 5.0e-69 | 2 | 480 | 546 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-69 | 1 | 313 | 318 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAZ15705.1 | 0 | 2 | 487 | 142 | 627 | endo-alpha-1,4-glucanase [Gossypium hirsutum] |
GenBank | ABK95015.1 | 0 | 2 | 485 | 141 | 624 | unknown [Populus trichocarpa] |
EMBL | CBI39076.1 | 0 | 1 | 486 | 150 | 635 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 2 | 485 | 118 | 601 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 7 | 485 | 133 | 611 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 2 | 487 | 120 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 2 | 487 | 120 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iew_A | 0 | 2 | 487 | 120 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iev_A | 0 | 2 | 487 | 120 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1ieq_A | 0 | 2 | 487 | 120 | 605 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DW500162 | 318 | 156 | 473 | 0 |
DT552183 | 299 | 67 | 365 | 0 |
DT569328 | 316 | 140 | 455 | 0 |
GR716701 | 285 | 123 | 407 | 0 |
HO784016 | 359 | 2 | 360 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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