Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.007G260100.1 |
Family | GH3 |
Protein Properties | Length: 633 Molecular Weight: 69048.6 Isoelectric Point: 7.1369 |
Chromosome | Chromosome/Scaffold: 07 Start: 42699861 End: 42703879 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 110 | 343 | 0 |
SSRLGIPMIYGIDAVHGHNNVYKATIFPHNIGLGATRDPELVNRIGVVTALEVRATGIHYVFAPCIAVCRDPRWGRCYESYSEDPKIVQDMTEIIPGLQG QIPSSYPKGVPFVGGMESVAACAKHYIGDGGTTKGINENNTVIDNKGLLSIHMPGYVSSIRKGVATVMISYSSLNGVKMHANYEMVTNFLKKNLRFKGFV ISDWEGIDRITSPPHANYTYSIEASVNAGLDMIM |
Full Sequence |
---|
Protein Sequence Length: 633 Download |
MERPRIVGIL LMGILVWCCM ATSANADTKM IYKDSNQPYN VRIKDLMGRM TLEEKIGQMI 60 QIERNVSSPE VMRKYFIGSL LSGGGSEPTP QASPKDWIDM VNEFQKGSLS SRLGIPMIYG 120 IDAVHGHNNV YKATIFPHNI GLGATRDPEL VNRIGVVTAL EVRATGIHYV FAPCIAVCRD 180 PRWGRCYESY SEDPKIVQDM TEIIPGLQGQ IPSSYPKGVP FVGGMESVAA CAKHYIGDGG 240 TTKGINENNT VIDNKGLLSI HMPGYVSSIR KGVATVMISY SSLNGVKMHA NYEMVTNFLK 300 KNLRFKGFVI SDWEGIDRIT SPPHANYTYS IEASVNAGLD MIMLPYNYTE FIDGLTYLVK 360 NNFVPMSRID DAVKRILLVK FTMGLFENPL ADEKIVEQLG CEAHRELARE AVRKSLVLLK 420 NGKSADAPLL PLPKKASNIL VAGSHADNLG YQCGGWTIKW MGFSGNNLTT GTTILTAIKN 480 TVEPTTKVVY NENPDAEFVK SGGFSYAIVV VGEHPYAETK GDNLNLTIPE PGPSTITNVC 540 GTVKCVVVVV SGRPVVIQPY VASIEALVAA WLPGSEGQGV ADVLFGDFGF TGKLSFTWFK 600 TVDQLPMHVG DPHYDPLFPL GFGLTTQPAK AQ* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 6.0e-8 | 565 | 625 | 83 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-32 | 416 | 625 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 7.0e-58 | 43 | 447 | 436 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-89 | 50 | 458 | 420 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-92 | 51 | 377 | 331 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAZ15705.1 | 0 | 1 | 631 | 1 | 626 | endo-alpha-1,4-glucanase [Gossypium hirsutum] |
GenBank | ABK95015.1 | 0 | 9 | 630 | 6 | 624 | unknown [Populus trichocarpa] |
RefSeq | XP_002266470.1 | 0 | 30 | 631 | 26 | 627 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 30 | 630 | 1 | 601 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 14 | 630 | 4 | 611 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 30 | 630 | 3 | 603 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 1iex_A | 0 | 30 | 630 | 3 | 603 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 1iew_A | 0 | 30 | 630 | 3 | 603 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 1iev_A | 0 | 30 | 630 | 3 | 603 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 1ieq_A | 0 | 30 | 630 | 3 | 603 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |