Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10013647 |
Family | GH3 |
Protein Properties | Length: 496 Molecular Weight: 54163.3 Isoelectric Point: 6.9336 |
Chromosome | Chromosome/Scaffold: 317 Start: 282572 End: 286413 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 57 | 236 | 2.3e-36 |
TFKGIRDPELVKRIGAATALEVRATGIPYVFAPSIASYPSRSKTGDLAANSDKGIPYVAGKTKVATCTENFVGDGGTVDGIDENNTIIDWDGPMKIHMPP YYTSISKGVSSVLISYSSLNGIKMHANQKMITDFLKGTLRFMGFVISNWERIDRITSPPYTNYTYSVETANPAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 496 Download |
MQKGLKFCLE AKRGLEFLLP SLRDRSEIAM VSPGRDDAEN KQGKDALQLG KEEPATTFKG 60 IRDPELVKRI GAATALEVRA TGIPYVFAPS IASYPSRSKT GDLAANSDKG IPYVAGKTKV 120 ATCTENFVGD GGTVDGIDEN NTIIDWDGPM KIHMPPYYTS ISKGVSSVLI SYSSLNGIKM 180 HANQKMITDF LKGTLRFMGF VISNWERIDR ITSPPYTNYT YSVETANPAG IDMVMVPHNY 240 TEFIEDLTML VNKGFIPISR IDDAVKRILR VKFVMGLFEA PMADESLVHE LDSKEHRASA 300 REAVRKSLVL LKNGKDANQP LLPFPKKAPK ILVAGAHADN LGYQCGGWAI EWKGFSGNDR 360 TTGTTILSAI KSTVDPSTEV VYQENPAEEY VKSNNFSYAI VVVGEQPYAE AMGDSSNLMI 420 PSHGLSTIQN ICSAVKCVVV VISGRPVVIE PYVSPLFLPV SLELKVKVWL MFCSETMASL 480 GNFQGHGSRE LISCL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 3.0e-10 | 153 | 436 | 305 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-14 | 308 | 434 | 140 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-26 | 63 | 349 | 313 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 2.0e-36 | 62 | 271 | 230 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 5.0e-44 | 54 | 350 | 310 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 62 | 454 | 140 | 556 | unknown [Populus trichocarpa] |
EMBL | CBI39076.1 | 0 | 63 | 470 | 151 | 576 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266470.1 | 0 | 62 | 470 | 142 | 568 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 62 | 454 | 117 | 533 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 68 | 454 | 133 | 543 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 62 | 454 | 119 | 535 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1x38_A | 0 | 62 | 454 | 119 | 535 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1lq2_A | 0 | 62 | 454 | 119 | 535 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 62 | 454 | 119 | 535 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 62 | 454 | 119 | 535 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT552183 | 298 | 105 | 402 | 0 |
HO784016 | 360 | 62 | 397 | 0 |
DY668382 | 299 | 101 | 398 | 0 |
DT743105 | 292 | 101 | 392 | 0 |
FY793668 | 292 | 120 | 411 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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