Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10019305m |
Family | GH3 |
Protein Properties | Length: 628 Molecular Weight: 68582.6 Isoelectric Point: 6.573 |
Chromosome | Chromosome/Scaffold: 3 Start: 41513567 End: 41516390 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 94 | 329 | 0 |
LSTRLGIPMIYGIDAVHGHNNVYNATIFPHNIGLGATRDPDLVKRIGAATALEVRATGIPYTFAPCIAVCRDPRWGRCYESYSEDPKIVQAMTELIPGLQ GDIPAGSPKGVPYVAGKTKVAACAKHFVGDGGTINGVNENNTIIDRHGLLAIHMPAYYNSIIKGVSTVMVSYSSWNGIKMHANQELVTGFLKNTLQFRGF VITDWEGLDRITSPPHANYSYSVEVGIKAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 628 Download |
MGLLLLCCLA EAEYLKYKDP KQPLHVRVND LVSRMTLEEK IGQMTQIERG VASAEVMKKY 60 FIGSVLTGGG SAPARQASAE AWINIINDFQ KGALSTRLGI PMIYGIDAVH GHNNVYNATI 120 FPHNIGLGAT RDPDLVKRIG AATALEVRAT GIPYTFAPCI AVCRDPRWGR CYESYSEDPK 180 IVQAMTELIP GLQGDIPAGS PKGVPYVAGK TKVAACAKHF VGDGGTINGV NENNTIIDRH 240 GLLAIHMPAY YNSIIKGVST VMVSYSSWNG IKMHANQELV TGFLKNTLQF RGFVITDWEG 300 LDRITSPPHA NYSYSVEVGI KAGIDMVMVP YNYIEFIDDL TFQVKNNIIP MSRIDDAVRR 360 ILRVKFVMGL FENPLADDSL VDQLGSQEHR ELAREAVRKS LVLLKNGDST EVPLLPLPKK 420 TSKILPLPKK TSKILVAGSH ADNLGYQCGG WTIEWQGLSG NDLTRGTTIL NAIKNTVDQQ 480 TEVVYQENPD ANFVKSNNFS YAIVVVGEHP YAETNGDSMN LNIADPGPNT ITNVCGAVEC 540 VVVVISGRPV VIQPYLSYID ALVAAWLPGT EGQGVADVLF GDYDFTGKLP RTWFKTVDQL 600 PMNVGDPHYD PLFPFGFGLT TKSRQTS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 8.0e-13 | 560 | 620 | 83 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-40 | 401 | 620 | 248 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 8.0e-62 | 28 | 485 | 472 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 4.0e-87 | 35 | 453 | 429 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-93 | 36 | 364 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAZ15705.1 | 0 | 1 | 622 | 11 | 622 | endo-alpha-1,4-glucanase [Gossypium hirsutum] |
GenBank | ABK95015.1 | 0 | 1 | 626 | 9 | 625 | unknown [Populus trichocarpa] |
RefSeq | XP_002319151.1 | 0 | 17 | 626 | 3 | 602 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 1 | 626 | 1 | 612 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525724.1 | 0 | 1 | 622 | 9 | 621 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 13 | 625 | 1 | 603 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1iex_A | 0 | 13 | 625 | 1 | 603 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1iew_A | 0 | 13 | 625 | 1 | 603 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1iev_A | 0 | 13 | 625 | 1 | 603 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1ieq_A | 0 | 13 | 625 | 1 | 603 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |