Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G153900.2 |
Family | GH3 |
Protein Properties | Length: 628 Molecular Weight: 68350.1 Isoelectric Point: 9.2253 |
Chromosome | Chromosome/Scaffold: 09 Start: 12025721 End: 12030673 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 106 | 339 | 0 |
STRLGIPMIYGIDAVHGHSNVYNATIFPHNVGLGVTRQLVKKIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDHRIVQLMTEIIPGLQGEL PANSKKGVPFVAPGNTKVAACAKHFVGDGGTTKGIDENNTVISMNGLLNIHMPAYYNAISKGVATVMVSYSSWNGKRMHINRDLVTGFLKNKMKFRGFVI SDWQGIDRVTSPPHANYSSSVHAGVDAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 628 Download |
MGRLSRPILG FLLLCCLIVA GEAEYLKYKD PKMPIGARIK DLMKRMTLEE KIGQMVQIER 60 TVATPDVMKQ YFIGSVLSGG GSVPGPKASA EAWVNLVNGI QKASLSTRLG IPMIYGIDAV 120 HGHSNVYNAT IFPHNVGLGV TRQLVKKIGE ATALEVRATG IPYAFAPCIA VCRDPRWGRC 180 YESYSEDHRI VQLMTEIIPG LQGELPANSK KGVPFVAPGN TKVAACAKHF VGDGGTTKGI 240 DENNTVISMN GLLNIHMPAY YNAISKGVAT VMVSYSSWNG KRMHINRDLV TGFLKNKMKF 300 RGFVISDWQG IDRVTSPPHA NYSSSVHAGV DAGIDMIMVP FNFTEFIDDL TYQVKNNIIP 360 MSRINDAVQR ILRVKFVMGL FEKPLADLSM ANQLGSQEHR ELAREAVRKS LVLLKNGKYS 420 TAKPFLPLPK KAPKILIAGS HADNLGYQCG GWTITWQGLG GNDLTTGTTI LNAVKNTVDP 480 TTQVVYNENP DSNFVKSNKF SYAIVVVGEP PYAEMYGDSS NLTISEPGPS TINNVCGAVK 540 CVVIVISGRP VVIQPYLEKI DALVAAWLPG TEGQGVVDNL FGDYGFTGKL ARTWFKTVDQ 600 LPMNVGDPHY DPLFPFGFGI TTKPAKN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 4.0e-12 | 477 | 621 | 177 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-35 | 411 | 621 | 230 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-52 | 37 | 416 | 393 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-75 | 46 | 416 | 380 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 5.0e-88 | 47 | 374 | 334 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 1 | 624 | 1 | 624 | beta-D-glucosidase [Gossypium hirsutum] |
EMBL | CAA07070.1 | 0 | 1 | 625 | 1 | 626 | beta-D-glucosidase [Tropaeolum majus] |
RefSeq | XP_002278363.1 | 0 | 1 | 627 | 1 | 627 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002313632.1 | 0 | 1 | 627 | 1 | 627 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523935.1 | 0 | 1 | 627 | 1 | 632 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 24 | 626 | 1 | 603 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 1iex_A | 0 | 24 | 626 | 1 | 603 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 1iew_A | 0 | 24 | 626 | 1 | 603 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 1iev_A | 0 | 24 | 626 | 1 | 603 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 1ieq_A | 0 | 24 | 626 | 1 | 603 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |