Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g069800.1 |
Family | GH3 |
Protein Properties | Length: 605 Molecular Weight: 66503.9 Isoelectric Point: 5.0056 |
Chromosome | Chromosome/Scaffold: 5 Start: 28622264 End: 28626009 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 83 | 318 | 0 |
LESRLGIPIIYCTDAIHGNNNVYGTTIFPHNVGLGATRDADLVQKIAAATSLELRASGTHYTLAPSVSVCKDPRWGRCYESYSEDTEIVQNMTSYVSGLQ GQPPEHYRKGYPFLAGRNKAIACARHFVGDGGTEKGVNEGNTILSYEDLEKIHMAPYVDCIAQGVSTIMVSYSSWNGVKLHGHHFLINDILKEKLGFKGF VISDWEGIDELCQPYGSDYRYCISTSINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 605 Download |
MDSVYRNPTE TVEDRIKNLL SLMTLKEKIG QMTQIERSVT TPSAIKDFTI GSVYCAPPNS 60 ATAKKEVSSD WADMVDGFQK LALESRLGIP IIYCTDAIHG NNNVYGTTIF PHNVGLGATR 120 DADLVQKIAA ATSLELRASG THYTLAPSVS VCKDPRWGRC YESYSEDTEI VQNMTSYVSG 180 LQGQPPEHYR KGYPFLAGRN KAIACARHFV GDGGTEKGVN EGNTILSYED LEKIHMAPYV 240 DCIAQGVSTI MVSYSSWNGV KLHGHHFLIN DILKEKLGFK GFVISDWEGI DELCQPYGSD 300 YRYCISTSIN AGIDMVMVPL RYEQFMEELT SLVQSGEVPM TRIDDAVERI LRVKFIAELF 360 EFPLTDRSLL DTVGCKIHRD LAREAVRKSL VLLKNGKEPS KPFIPLNKNA KRILVAGTHA 420 NDIGYQCGGW TFTKYGSSGQ ITIGTTILDA VKEAVGHDTE VIYEKCPSTE FIECNEFSFA 480 IVAIGEAPYA ECGGDNKELV IPFNGAGIVD IIADKIPTLV ILISGRPLVL EQGLLEKTEA 540 LVAAWLPGSE GKGITDVIFG DHDFKGKLPM TWFRRIEQLD EPSEGVNSCD DPLFPLGYGL 600 ACNK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 5.0e-34 | 7 | 573 | 620 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-43 | 390 | 600 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-78 | 11 | 601 | 669 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 4.0e-85 | 24 | 353 | 334 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 2.0e-86 | 23 | 455 | 443 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 1 | 604 | 1 | 634 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_190284.1 | 0 | 4 | 600 | 9 | 603 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002279757.1 | 0 | 1 | 604 | 113 | 715 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 4 | 602 | 7 | 596 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 4 | 604 | 5 | 602 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 4 | 603 | 4 | 600 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1x38_A | 0 | 4 | 603 | 4 | 600 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1lq2_A | 0 | 4 | 603 | 4 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 4 | 603 | 4 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 4 | 603 | 4 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 356 | 132 | 484 | 0 |
HO795479 | 322 | 279 | 600 | 0 |
HO784016 | 420 | 60 | 478 | 0 |
FC882555 | 290 | 132 | 421 | 0 |
HO784016 | 48 | 5 | 52 | 0.0001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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