Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G242500.1 |
Family | GH17 |
Protein Properties | Length: 338 Molecular Weight: 36868.7 Isoelectric Point: 4.1639 |
Chromosome | Chromosome/Scaffold: 09 Start: 19388659 End: 19390063 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 336 | 0 |
IGVCYGLNGNNLPSPGDVINLYKTSGINNIRLYQPYPEVLEAARGSGISLSMGPRNEDIQSLAKDQSAADAWVNTNIVPYKDDVQFKLITIGNEAISGQS SSYIPDAMNNIMNSLASFGLGTTKVTTVVPMNALSTSYPPSDGAFGSDITSIMTSIMAILAVQDSPLLINVYPYFAYASDPTHISLDYALFTSTAPVVVD QGLEYYNLFDGMVDAFNAALDKIGFGQITLIVAETGWPTAGNEPYTSVANAQTYNKNLLNHVTQKGTPKRPEYIMPTFFFEMFNEDLKQPTVEQNFGFFF PNMNPVYPF |
Full Sequence |
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Protein Sequence Length: 338 Download |
MGPRFSGFLI SAMVFLTQLL SLTDGRDIGV CYGLNGNNLP SPGDVINLYK TSGINNIRLY 60 QPYPEVLEAA RGSGISLSMG PRNEDIQSLA KDQSAADAWV NTNIVPYKDD VQFKLITIGN 120 EAISGQSSSY IPDAMNNIMN SLASFGLGTT KVTTVVPMNA LSTSYPPSDG AFGSDITSIM 180 TSIMAILAVQ DSPLLINVYP YFAYASDPTH ISLDYALFTS TAPVVVDQGL EYYNLFDGMV 240 DAFNAALDKI GFGQITLIVA ETGWPTAGNE PYTSVANAQT YNKNLLNHVT QKGTPKRPEY 300 IMPTFFFEMF NEDLKQPTVE QNFGFFFPNM NPVYPFW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-9 | 55 | 326 | 284 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 9.0e-116 | 28 | 336 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05913.1 | 0 | 8 | 336 | 10 | 335 | Glycoside hydrolase, family 17 [Medicago truncatula] |
DDBJ | BAA21110.1 | 0 | 5 | 270 | 1 | 266 | endo-1,3-beta-glucanase [Gossypium hirsutum] |
RefSeq | NP_177901.1 | 0 | 8 | 337 | 2 | 333 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002302261.1 | 0 | 28 | 337 | 7 | 317 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306606.1 | 0 | 29 | 337 | 1 | 309 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 334 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 27 | 329 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 27 | 329 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 27 | 329 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 27 | 329 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |