Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10014108 |
Family | GH17 |
Protein Properties | Length: 564 Molecular Weight: 62874.8 Isoelectric Point: 9.8753 |
Chromosome | Chromosome/Scaffold: 1247 Start: 438770 End: 441907 |
Description | beta-1,3-glucanase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 234 | 544 | 0 |
IGVCYGMLGRVPPPREVIALYKQNNIRRMRLYDPNQAALQALRGTNIELILGVPNDQLRPVATSQANANSWVRTNVVKYANNVRFRYIAVGNEVQPRDNR YAPFLVQAIRNIQTAINSAKLGSRIKVSTAFDYGIMGKSSPPSQGSFKAEYKNLLDPILRHLAANRSPMLLNMYPFFSYRDNMGQIRRDYALFTAPPGLV PDPPLKYSNLFDAMLDATYSALEKVRMGSLNIVVSETGWSTAGGGPSTTLENARIYNNNLIQHVKRGSPKRPNRPIETYIFAMFDEVDKSPELEKHFGLF SVNKQRKYPIK |
Full Sequence |
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Protein Sequence Length: 564 Download |
METILPVLFT TTALLLATQA TPAATEYAVI NNAGDTKGGV LFSSRIGEQY AKDTMEAASN 60 FIFKIFNQPD PARRKPVTNV IAVIDGNTTD AGFYASDYDF HIGAKYLANF TGGDAKFGFS 120 GLVYRYMAYV WGWDGGGKAP AGLRSGIGEY VRLKAGFGPR RYWAGKRDVG TYWAEGGEMT 180 ARFLNYCVGL RKGFVWEMNE RMKGEYSDGI FKILLGKDVD QLWHDYKAKY DAQIGVCYGM 240 LGRVPPPREV IALYKQNNIR RMRLYDPNQA ALQALRGTNI ELILGVPNDQ LRPVATSQAN 300 ANSWVRTNVV KYANNVRFRY IAVGNEVQPR DNRYAPFLVQ AIRNIQTAIN SAKLGSRIKV 360 STAFDYGIMG KSSPPSQGSF KAEYKNLLDP ILRHLAANRS PMLLNMYPFF SYRDNMGQIR 420 RDYALFTAPP GLVPDPPLKY SNLFDAMLDA TYSALEKVRM GSLNIVVSET GWSTAGGGPS 480 TTLENARIYN NNLIQHVKRG SPKRPNRPIE TYIFAMFDEV DKSPELEKHF GLFSVNKQRK 540 YPIKLNSKCS KLANVTEDTA LDT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd01974 | Nitrogenase_MoFe_beta | 0.005 | 345 | 452 | 113 | + Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction. | ||
COG5309 | COG5309 | 0.004 | 461 | 537 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam04450 | BSP | 2.0e-41 | 27 | 226 | 207 | + Peptidase of plants and bacteria. These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-136 | 234 | 544 | 313 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF33405.1 | 0 | 232 | 545 | 32 | 342 | AF230109_1 beta-1,3 glucanase [Populus tremula x Populus alba] |
GenBank | AAL30426.1 | 0 | 232 | 546 | 33 | 343 | AF435089_1 beta-1,3-glucanase [Prunus persica] |
GenBank | ACD45060.1 | 0 | 232 | 546 | 33 | 345 | beta-1,3-glucanase [Vitis riparia] |
EMBL | CAA03908.1 | 0 | 232 | 546 | 21 | 336 | beta-1,3-glucanase [Citrus sinensis] |
RefSeq | XP_002277827.1 | 0 | 232 | 546 | 33 | 345 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 233 | 541 | 1 | 311 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3f55_C | 0 | 233 | 541 | 1 | 311 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3f55_B | 0 | 233 | 541 | 1 | 311 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3f55_A | 0 | 233 | 541 | 1 | 311 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3em5_D | 0 | 233 | 541 | 1 | 311 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |