Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_179.28 |
Family | GH17 |
Protein Properties | Length: 279 Molecular Weight: 30986.1 Isoelectric Point: 4.1507 |
Chromosome | Chromosome/Scaffold: 179 Start: 194568 End: 195404 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 277 | 0 |
GLGQAPGAAQGWVNYFITPYANDVNFQWITLGNEDIPGEEAPFIASAMTNIKDALTSIGLGHVLVTTVLSQKALAASYPPSAGIFAPEIKTIMNDVATVL SSTNTPLMINVYPYFAYANDPSEISIDYVMFNSSEVVVQDRPYSYYTLFDAMVDAFNAALENINHGDVGIAVAETGWPTAGNPPFSSIEYAQTYNRGVYN HVFQYGTPRRPEVRMDTLFFAMFNEDLKPFGVERNFGFFYPNMQPVYPF |
Full Sequence |
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Protein Sequence Length: 279 Download |
MNQTLQCSMP CVDQESWWPL VLKTVTCKGL GQAPGAAQGW VNYFITPYAN DVNFQWITLG 60 NEDIPGEEAP FIASAMTNIK DALTSIGLGH VLVTTVLSQK ALAASYPPSA GIFAPEIKTI 120 MNDVATVLSS TNTPLMINVY PYFAYANDPS EISIDYVMFN SSEVVVQDRP YSYYTLFDAM 180 VDAFNAALEN INHGDVGIAV AETGWPTAGN PPFSSIEYAQ TYNRGVYNHV FQYGTPRRPE 240 VRMDTLFFAM FNEDLKPFGV ERNFGFFYPN MQPVYPFW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 3.0e-79 | 30 | 277 | 250 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05913.1 | 0 | 20 | 277 | 78 | 335 | Glycoside hydrolase, family 17 [Medicago truncatula] |
RefSeq | NP_177901.1 | 0 | 27 | 278 | 82 | 333 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_177902.1 | 0 | 28 | 278 | 89 | 342 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002302261.1 | 0 | 6 | 278 | 30 | 317 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306606.1 | 0 | 30 | 278 | 61 | 309 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 27 | 275 | 59 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 40 | 277 | 72 | 304 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 40 | 277 | 72 | 304 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 40 | 277 | 72 | 304 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_D | 0 | 34 | 270 | 66 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK802300 | 235 | 45 | 279 | 0 |
JK804435 | 230 | 50 | 279 | 0 |
GR710242 | 226 | 27 | 252 | 0 |
JG451228 | 197 | 83 | 279 | 0 |
JK804836 | 193 | 87 | 279 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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