Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g076570.1 |
Family | GH17 |
Protein Properties | Length: 362 Molecular Weight: 39919.3 Isoelectric Point: 4.7454 |
Chromosome | Chromosome/Scaffold: 4 Start: 24752238 End: 24754510 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 22 | 332 | 0 |
LGVCYGRVANNLPSAEEVIDLYKINGIGRMRIYDPDQATLEALRGSNIELVIGVRNEDIQSIAYSVSSATNWVQNNILKYSQDVKFRYIVVGNEINPSND ATSKFVLLAMQNIYTALASSNLQNQIKVSTAIQMNLLGSSYPPSQGVFSPSSISYIIPIVKFLVDNEAPLLANVYTYFSYISDTKDIDLSFALFTSTTIK VHDGQYAYQNLFDATLGALYAALEKIGGANLEVVVSESGWPSDGGVAASIENAQIYHENLIKHVITGTPNRPNQALETYLFAMFDENNKGPDETERHYGL FTPDKQIKYQI |
Full Sequence |
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Protein Sequence Length: 362 Download |
MVFLLLLLVL IGLETTGTAQ SLGVCYGRVA NNLPSAEEVI DLYKINGIGR MRIYDPDQAT 60 LEALRGSNIE LVIGVRNEDI QSIAYSVSSA TNWVQNNILK YSQDVKFRYI VVGNEINPSN 120 DATSKFVLLA MQNIYTALAS SNLQNQIKVS TAIQMNLLGS SYPPSQGVFS PSSISYIIPI 180 VKFLVDNEAP LLANVYTYFS YISDTKDIDL SFALFTSTTI KVHDGQYAYQ NLFDATLGAL 240 YAALEKIGGA NLEVVVSESG WPSDGGVAAS IENAQIYHEN LIKHVITGTP NRPNQALETY 300 LFAMFDENNK GPDETERHYG LFTPDKQIKY QIGQLFISSD SRTKTCDKKK DKSKLKLLDE 360 E* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0003 | 249 | 326 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-142 | 22 | 332 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABB82365.1 | 0 | 20 | 332 | 21 | 335 | class I beta-1,3-glucanase [Vitis vinifera] |
DDBJ | BAE53383.1 | 0 | 1 | 332 | 16 | 340 | beta-1,3-glucanase [Sesbania rostrata] |
RefSeq | XP_002277169.1 | 0 | 20 | 332 | 21 | 335 | PREDICTED: class I beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002299791.1 | 0 | 4 | 332 | 10 | 335 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336706.1 | 0 | 19 | 332 | 10 | 320 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 22 | 332 | 2 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3f55_C | 0 | 22 | 332 | 2 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3f55_B | 0 | 22 | 332 | 2 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3f55_A | 0 | 22 | 332 | 2 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3em5_D | 0 | 22 | 332 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |