Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr7g081370.1 |
Family | GH17 |
Protein Properties | Length: 327 Molecular Weight: 35404.4 Isoelectric Point: 4.9282 |
Chromosome | Chromosome/Scaffold: 7 Start: 23475987 End: 23477191 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 28 | 323 | 0 |
IGVNFGRNGDNLPSPQNVVGLYNKCGIKLLKLFEPSPDILEALKGSNIQVSLGVRNQDLQSLASTKEAANQWVNTNVAPYKGGVNFQWIVLGNEIIPGAQ ASFVTQAMQNIKDALTSIGLTDIKVTTSFYMQGLASSYPPSAGAFTNDVVNVMKDVTAYLHQTGAPLMVNVYPYFAYASNPKDIKLEYATFQAVAPVVDG ELSYTKLFDAMVDSIYAALEKIDAKDVSLIIGETGWPAAGNDPYTSKENSGKGTPRRPNQAINVLIFAMFDEDQKAAGVEQNWGLFYHDMTPVYPL |
Full Sequence |
---|
Protein Sequence Length: 327 Download |
MASLRIKSIF LTLALILTVQ RPLSTEGIGV NFGRNGDNLP SPQNVVGLYN KCGIKLLKLF 60 EPSPDILEAL KGSNIQVSLG VRNQDLQSLA STKEAANQWV NTNVAPYKGG VNFQWIVLGN 120 EIIPGAQASF VTQAMQNIKD ALTSIGLTDI KVTTSFYMQG LASSYPPSAG AFTNDVVNVM 180 KDVTAYLHQT GAPLMVNVYP YFAYASNPKD IKLEYATFQA VAPVVDGELS YTKLFDAMVD 240 SIYAALEKID AKDVSLIIGE TGWPAAGNDP YTSKENSGKG TPRRPNQAIN VLIFAMFDED 300 QKAAGVEQNW GLFYHDMTPV YPLLSC* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-6 | 65 | 316 | 271 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-111 | 28 | 323 | 309 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05912.1 | 0 | 1 | 326 | 1 | 319 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ABN05913.1 | 0 | 1 | 326 | 1 | 338 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ACF06549.1 | 0 | 5 | 323 | 6 | 336 | beta-1,3-glucanase [Elaeis guineensis] |
RefSeq | XP_002302261.1 | 0 | 27 | 326 | 6 | 319 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306606.1 | 0 | 29 | 323 | 1 | 308 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 321 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 28 | 323 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 28 | 323 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 28 | 323 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 28 | 323 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |