Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.016G057600.1 |
Family | GH17 |
Protein Properties | Length: 344 Molecular Weight: 37900 Isoelectric Point: 8.7462 |
Chromosome | Chromosome/Scaffold: 16 Start: 3860522 End: 3862044 |
Description | beta-1,3-glucanase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 34 | 341 | 0 |
IGVCYGMNGNLPPAQEVIDLYNQRGIRRMRLYDPNQDALRALGGTNIELMLGLPNSDLERIASSQTNANAWVQRNVRSFGNVRFRYIAVGNEVRPFDSYA QFLVPAMKNIRNALYSAGLGNIKVSTAIDNGVIEDDSSPPSKGSFRGDHRPFLDPIIRFLLNNQAPLLVNLYPYLSYTGNSEDIRLDYALFTAPSSLVSD PPLNYQNLFDAILDTVYAALEKSGGGSLDIVVSESGWPTAGGTGTSVDNARIYNNNLVQHVKRGSPKKPGKPIETYIFSMFDENYKNPELEKHWGLFLPN KQPKYNIN |
Full Sequence |
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Protein Sequence Length: 344 Download |
MARSNIAGKS PSMISIMLLF GLLLASLDTT GAQIGVCYGM NGNLPPAQEV IDLYNQRGIR 60 RMRLYDPNQD ALRALGGTNI ELMLGLPNSD LERIASSQTN ANAWVQRNVR SFGNVRFRYI 120 AVGNEVRPFD SYAQFLVPAM KNIRNALYSA GLGNIKVSTA IDNGVIEDDS SPPSKGSFRG 180 DHRPFLDPII RFLLNNQAPL LVNLYPYLSY TGNSEDIRLD YALFTAPSSL VSDPPLNYQN 240 LFDAILDTVY AALEKSGGGS LDIVVSESGW PTAGGTGTSV DNARIYNNNL VQHVKRGSPK 300 KPGKPIETYI FSMFDENYKN PELEKHWGLF LPNKQPKYNI NLR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 258 | 330 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-151 | 34 | 341 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF33405.1 | 0 | 1 | 343 | 1 | 343 | AF230109_1 beta-1,3 glucanase [Populus tremula x Populus alba] |
GenBank | AAL30426.1 | 0 | 1 | 342 | 1 | 342 | AF435089_1 beta-1,3-glucanase [Prunus persica] |
GenBank | ACD45060.1 | 0 | 10 | 342 | 11 | 344 | beta-1,3-glucanase [Vitis riparia] |
RefSeq | XP_002277827.1 | 0 | 10 | 342 | 11 | 344 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308018.1 | 0 | 1 | 293 | 1 | 294 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 33 | 342 | 1 | 315 | A Chain A, The Structure Of Hcinap-Adp Complex At 1.76 Angstroms Resolution. |
PDB | 3f55_C | 0 | 33 | 342 | 1 | 315 | A Chain A, The Structure Of Hcinap-Adp Complex At 1.76 Angstroms Resolution. |
PDB | 3f55_B | 0 | 33 | 342 | 1 | 315 | A Chain A, The Structure Of Hcinap-Adp Complex At 1.76 Angstroms Resolution. |
PDB | 3f55_A | 0 | 33 | 342 | 1 | 315 | A Chain A, The Structure Of Hcinap-Adp Complex At 1.76 Angstroms Resolution. |
PDB | 3em5_D | 0 | 33 | 342 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |