Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G184100.2 |
Family | GT47 |
Protein Properties | Length: 378 Molecular Weight: 43865.1 Isoelectric Point: 8.9366 |
Chromosome | Chromosome/Scaffold: 02 Start: 48851397 End: 48855044 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 1 | 311 | 0 |
MYDLPRKFHVGMMDRRSFEGPAPVTADNLPPWPSNSGIKKQHSVEYWLMASLLYGGNGNEDREAVRVSDPESAEAFFVPFFSSLSFNTHGHNMTDPETEV DRRLQVELLEFLQKSKYYQRSGGRDHVIPMTHPNAFRFLRQELNASILIVVDFGRYPKTMSSLSKDVVAPYVHVVDSFTDDDALDPYESRTTLLFFRGNT VRKDQGKIRIKLAKILSGIDDVHYEKSVATPKNIIMSTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDKIELPYEDEIDYSEFSIFFSMKEAL EPGYLVNQLRQ |
Full Sequence |
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Protein Sequence Length: 378 Download |
MYDLPRKFHV GMMDRRSFEG PAPVTADNLP PWPSNSGIKK QHSVEYWLMA SLLYGGNGNE 60 DREAVRVSDP ESAEAFFVPF FSSLSFNTHG HNMTDPETEV DRRLQVELLE FLQKSKYYQR 120 SGGRDHVIPM THPNAFRFLR QELNASILIV VDFGRYPKTM SSLSKDVVAP YVHVVDSFTD 180 DDALDPYESR TTLLFFRGNT VRKDQGKIRI KLAKILSGID DVHYEKSVAT PKNIIMSTEG 240 MRSSKFCLHP AGDTPSSCRL FDAIVSHCVP VIVSDKIELP YEDEIDYSEF SIFFSMKEAL 300 EPGYLVNQLR QFPKDRWVEM WKQLKNISHH FEFQYPPKKE DGVNMLWRQV KRKLPRAQLA 360 IHRSRRLKVP DWWQRRR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 9.0e-71 | 1 | 312 | 320 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC18793.1 | 0 | 1 | 354 | 57 | 440 | End is cut off [Arabidopsis thaliana] |
RefSeq | NP_176908.2 | 0 | 1 | 373 | 57 | 429 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002272591.1 | 0 | 1 | 377 | 57 | 430 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311068.1 | 0 | 1 | 373 | 6 | 380 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512333.1 | 0 | 1 | 376 | 60 | 434 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY266782 | 311 | 1 | 311 | 0 |
FC916665 | 307 | 1 | 307 | 0 |
CO083280 | 248 | 1 | 247 | 0 |
EC955869 | 281 | 71 | 351 | 0 |
CO083280 | 22 | 228 | 249 | 3.6 |
Sequence Alignments (This image is cropped. Click for full image.) |
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