Basic Information | |
---|---|
Species | Physcomitrella patens |
Cazyme ID | Pp1s30_180V6.1 |
Family | GT47 |
Protein Properties | Length: 559 Molecular Weight: 62563.9 Isoelectric Point: 7.9025 |
Chromosome | Chromosome/Scaffold: 30 Start: 1183529 End: 1186246 |
Description | exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 174 | 497 | 0 |
AKLKLFMYDLPPEFHYSMLVEQAYTGGQIWPKNISDIPPYPGGLYQQHSPEYWLTNDLLTSNMAGRQSACTAFRVNDWRAADLMFVPFFASLAYNRYTKS EHKVGGELDLVGDKNQKLQEKLLKFLEQQPAWQASGGSDHIVVIHHPNSFHAMRNFFSKAIFIVADFGRYPSEVANLRKDVVAPYKHVIPSFVDDSTPFE EREILLFFQGTIVRKQGGVIRQQLYEMLKNEKGVHFEEGSAGSAGIHSATTGMRRSKCCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDELDYS GFSIFINSTDAVQEKFVINLIRSV |
Full Sequence |
---|
Protein Sequence Length: 559 Download |
MKRGVGSGSR ENLLSKAFAV EQVAVPVHDS PPSSSNEVKL TCPPRLRLWR GFEELTTRHF 60 IISIVCLLSI FALSGSFMFT NSVRYSTKLF GGSYIDYRPQ LSLSDQNSWP FKSAWERSGL 120 VDDEDEGSGK ANLGSSRSGL DNEQNTNAGV GAGREGYAGG GGGTAPPGCT ERSAKLKLFM 180 YDLPPEFHYS MLVEQAYTGG QIWPKNISDI PPYPGGLYQQ HSPEYWLTND LLTSNMAGRQ 240 SACTAFRVND WRAADLMFVP FFASLAYNRY TKSEHKVGGE LDLVGDKNQK LQEKLLKFLE 300 QQPAWQASGG SDHIVVIHHP NSFHAMRNFF SKAIFIVADF GRYPSEVANL RKDVVAPYKH 360 VIPSFVDDST PFEEREILLF FQGTIVRKQG GVIRQQLYEM LKNEKGVHFE EGSAGSAGIH 420 SATTGMRRSK CCLNIAGDTP SSNRLFDAIA SHCVPVIISD EIELPFEDEL DYSGFSIFIN 480 STDAVQEKFV INLIRSVSRK EWMRLWKRLK EVSLHFEYQH PTKPYDAVNM VWRAVAHKVP 540 GVKLLLHKQQ HFSRSHQS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 7.0e-47 | 172 | 497 | 336 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001758016.1 | 0 | 78 | 558 | 1 | 481 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001759885.1 | 0 | 176 | 552 | 1 | 383 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001760871.1 | 0 | 180 | 550 | 1 | 370 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001761432.1 | 0 | 176 | 552 | 1 | 377 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001773896.1 | 0 | 180 | 552 | 1 | 369 | predicted protein [Physcomitrella patens subsp. patens] |