| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.002G210000.1 |
| Family | GT47 |
| Protein Properties | Length: 491 Molecular Weight: 55859.5 Isoelectric Point: 10.1944 |
| Chromosome | Chromosome/Scaffold: 02 Start: 18008397 End: 18011346 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 109 | 425 | 0 |
| RKLKVFVYDLPPEFHFGLLGWKGNTNQTWPNVDSHSRIPPYPGGLNLQHSVEYWLTLDLLASNTPKVGTAVRVQNSSQADIVFVPFFSSLSYNRHSKLHG KEKVSVNKMLQTKLVQFLTARDEWKRFGGNDHLIVAHHPNSMLHARKKLGSAMFVLADFGRYPVEIANLGKDIIAPYKHVVRTIPSGESAQFDRRPILMH FQGAIYRKDGGAIRQELYYLLKDEKDVHFTFGTYRGNGIKKAAQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDDIELPFEDVLDYSEFCLFVR ASDAVKKGYLLDLLRGI | |||
| Full Sequence |
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| Protein Sequence Length: 491 Download |
| MSEKAKFFSR SLFFLITISI FLLILSSFSL VQFPGTHFIP RSVFKLILVN STSFFLKPNA 60 QTELVKFPFF SSTDTNLSMR CGSLSCPNTN MGASRCYRNK TCGRNQALRK LKVFVYDLPP 120 EFHFGLLGWK GNTNQTWPNV DSHSRIPPYP GGLNLQHSVE YWLTLDLLAS NTPKVGTAVR 180 VQNSSQADIV FVPFFSSLSY NRHSKLHGKE KVSVNKMLQT KLVQFLTARD EWKRFGGNDH 240 LIVAHHPNSM LHARKKLGSA MFVLADFGRY PVEIANLGKD IIAPYKHVVR TIPSGESAQF 300 DRRPILMHFQ GAIYRKDGGA IRQELYYLLK DEKDVHFTFG TYRGNGIKKA AQGMASSKFC 360 LNIAGDTPSS NRLFDAIASH CVPVIISDDI ELPFEDVLDY SEFCLFVRAS DAVKKGYLLD 420 LLRGIEKDQW TKLWERLKEI APHFEYSYPS QPGDAVDMVW KAVLRKTSSV QFKRHRKNRY 480 ARPEAFLKRI * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 2.0e-56 | 109 | 425 | 326 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD55303.1 | 0 | 1 | 486 | 1 | 452 | AC008263_34 F25A4.34 [Arabidopsis thaliana] |
| RefSeq | XP_002284930.1 | 0 | 1 | 489 | 1 | 454 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002284932.1 | 0 | 80 | 489 | 3 | 415 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002320639.1 | 0 | 109 | 483 | 1 | 375 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514760.1 | 0 | 1 | 484 | 1 | 488 | catalytic, putative [Ricinus communis] |
